Phalacrocorax carbo (great cormorant): 104049956
Help
Entry
104049956 CDS
T08596
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104049956 (CTCF)
03036 Chromosome and associated proteins [BR:
pcao03036
]
104049956 (CTCF)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104049956 (CTCF)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104049956 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_6
A24_N_bact
Motif
Other DBs
NCBI-GeneID:
104049956
NCBI-ProteinID:
XP_009509031
UniProt:
A0A093R6M4
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDACHMPPNQADGGEVVQDVNSGVQM
VMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEQEAPAPPPSKKRRGRPPGKA
ATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcagttgaagctattgtggaggaatcagaaacttttattaaggggaaa
gagagaaaaacctatcagagacgccgtgaaggtgggcaggaggacgatgcttgtcatatg
ccaccaaatcaagcagatggaggtgaagtagtgcaggatgtcaacagtggtgtgcagatg
gtgatgatggaacagctggatccaacccttcttcaaatgaagactgaagtaatggaaggt
gcagtgcctcaagaaacagaggccacggtggatgacacacagatcataacacttcaggtt
gttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaagtacctgta
ccagtgactgtacctgttgccaccacgtctgtggaagaacttcagggagcttatgaaaat
gaggtttccaaaggaggcctgcaagagggagagcccatgatctgtcacaccctcccttta
ccagaaggcttccaagtagtgaaagtgggtgcaaatggtgaggtggagacactggaacaa
ggtgaacttcagccacaggaagatcccaattggcaaaaagatccagactatcagccacca
gccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacaccgaggaaggcaaagat
gtggatgtctctgtgtatgactttgaagaggagcagcaggagggtttgttgtcagaggtc
aatgcagaaaaggtggtgggcaatatgaaaccacctaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgaactgtgcagttacacttgtccgcgtcgttccaac
ttggaccgccacatgaaaagccacactgatgaaagaccacataagtgccatctctgtggc
agggcttttcggacagtcacattgctgaggaaccacctcaacactcacacaggtactcgc
cctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggttcggcat
cgccgctacaaacatacccatgagaaacccttcaaatgttcaatgtgtgattatgctagt
gtggaggttagcaaattgaaacggcacatccgttctcacactggagagcgtccgttccag
tgcagcttgtgcagctatgccagcagggatacctacaaactgaagagacacatgaggacc
cactctggagagaagccatatgaatgttacatctgccatgctcgcttcactcagagtggt
accatgaagatgcacattttgcagaagcacacagagaacgtggccaaatttcactgtcct
cactgtgatactgttatagcgagaaagagtgacttgggcgtccatttgcgaaagcagcat
tcctacattgaacagggcaagaagtgtcgctattgtgatgctgtgtttcatgagcggtat
gccctcatacagcatcaaaagtctcacaagaatgagaagcgcttcaagtgtgaccagtgc
gattatgcatgcagacaggagcggcacatggtcatgcataaacggacccatactggagaa
aagccttatgcctgtagccattgtgataaaactttccgtcagaaacagctcctcgatatg
cacttcaaacgatatcacgatcccaactttgtccctgctgcctttgtctgttccaagtgt
ggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctctggccta
gacggtggggaaggagagaatggaggagaaacgaagaagggcaaacgtggccgaaagaga
aagatgcggtctaagaaagaagattcctctgacagtgaggaaaatgctgaaccagatttg
gatgataatgaagatgaggaggagacagcagtagaaattgaggctgaaccagaagttgag
caagaggctcctgcaccacctcccagtaagaaacgaagaggaagaccaccaggcaaagct
gccacccaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccagaacact
ggtgaaattgaaaatattatagttgaagtaaagaaagaacctgatgcagaaacagtagag
gaagaggaggaagctcagcctgcagtagtggaagctcccaatggagacctcactcctgag
atgattctcagtatgatggaccggtga
DBGET
integrated database retrieval system
