Phalacrocorax carbo (great cormorant): 104050049
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Entry
104050049 CDS
T08596
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104050049 (SBNO1)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104050049 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104050049
NCBI-ProteinID:
XP_009509132
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDSPDGGMCFLMRAFFPLQSVPLSALELGLETEAT
AAVKQEPETVSNPALLNVRQQPPSTTTFVLNQINQLPTLGTTIVMTKTTPVTTTRQTITV
AKIIQTSTTTRPSVAAPAVRNALTTTPSKDQIQLKDLLKSNSLNELMKLKPPPNIAQPVA
TAATDLSNGAVKKEASTKEVARIWINDIKMRSFSPTMKVPAVKEEEEPEEEDEEEMGHAE
TYAEYMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQTSISEETIDSGWLSALQLEAITY
AAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAE
RDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQ
LLHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGAS
EPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSG
VTFKIDEVLLSQEYVKMYNKSVKLWVSARERFQQAADLIDAEQRMKKSMWGQFWSAHQRF
FKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGV
FQSLIEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKENKIKKRKGEEISREAKKAR
KTGGLAGSSSDESESESDASDNEESDNESSKFLSSGDDDDFNPFRDESSEDDEDDPWLIR
KEHKKNKDKKKKKSIDPDSIQSALLASGLGSKRPSCFTSTVGTTTSSTNTSANSNTNSSV
VTSQDAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSND
DGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRV
HMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTH
GDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDFPGDFFKDVRQGLIG
VGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTLNAVIQNAKKNGR
YDMGILDLGSGDEKVRKADVKKFLTPGYSTSGHVELYTISVERGMSWDEATKIWAEQSGP
DDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLETCADLKKKYKKVPSED
ALPHWLEQYNSSADTCTHAYWRGNCKKAGLGLVCEVGLRCRTYYVLCGSVLSVWTKVEGV
LASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQQQIWQQ
HHPQSITNFNNA
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccaggacaagacctgttgcttgctgctttgagtgagagtggaatcagtcca
aatgatctatttgatattgactcgccggacgggggcatgtgtttcctcatgcgtgctttc
tttcctctgcagtcggtgccacttagtgcgttagaactaggcttggagactgaggccaca
gctgctgtgaaacaagaaccagagactgtatcaaatccagccctattaaatgttcggcag
caaccaccatccaccacaacctttgtgctgaatcaaataaatcagcttccaactttgggg
actacaatagtgatgacaaaaacaacacctgttacaactacgaggcagactatcactgta
gcaaaaatcattcagaccagcacaactactcgaccctcggttgcagcaccagcagtacgc
aatgccttgaccactacaccttcaaaggaccagattcagttgaaagatctgctgaagagt
aatagtcttaatgaactcatgaaattgaagccacctcctaatattgcccaaccagtagca
acagcagcaaccgatctaagcaatggtgcagtgaagaaggaggcttccacaaaagaggta
gcaagaatatggataaatgatattaaaatgagaagtttttcacctactatgaaagtgcca
gcagtaaaagaagaggaagaacctgaggaagaagatgaagaagaaatgggccatgcagaa
acttacgctgaatatatgccaataaaattaaaaattggtcttcgtcatcctgacccagtg
gtggagaccagctcattatccagtgtaactcctcctgatgtgtggtaccagacatcaata
tcggaagaaacaattgacagtggctggttgtcagctttgcaacttgaagcgatcacttac
gcggcccagcaacatgaaacattcctgcccaatggagacagagctggattcttgataggt
gatggtgctggtgtaggaaaaggaaggaccatagctggaataatctatgaaaattacttg
ttaggcagaaaaagagcagtctggtttagcgtgtcaaatgatctgaaatacgatgctgaa
agagatttgagagatattggagcaaaaaacatactggttcattcattaaacaagttcaag
tatgggaaaatttcttccaaacacaatggaagtgtgaagaaaggtgtcatctttgctacc
tattcttctcttattggtgaaagtcagtctggtggtaaatacaaaaccagattaaagcag
ctccttcactggtgtggtgaagactttgatggagttattgtatttgatgagtgtcataaa
gctaagaatctgtgtcctgttggttcatcaaaaccaacaaaaacaggtctggctgtattg
gaacttcaaaataaacttccaaaagccagggttgtttatgctagtgccacaggtgcatct
gagccaagaaatatggcatatatgaaccgtcttggaatatggggtgaaggaactccattt
agggaattcagcgattttattcaggctgttgaaagaagaggtgttggtgccatggaaata
gttgctatggatatgaagctgagaggaatgtacatagcaagacagttgagtttttcaggt
gtaactttcaaaattgatgaagttctgctttcacaggaatatgttaaaatgtacaataaa
tctgtgaaactgtgggtcagtgccagagagaggtttcagcaagcagctgatctcatcgat
gcagaacagcgaatgaaaaagtctatgtggggtcaattttggtcagctcatcagaggttt
ttcaagtacctttgcatagcttctaaagtgaagagggtggtgcagctagctcgggaagaa
atcaagaacgggaaatgtgttgtaattggcctgcagtcaacaggagaggcaagaacatta
gaagctttggaggaaggtggtggtgaactgaatgactttgtttctacagcaaaaggagta
ttccagtctcttattgaaaagcactttccagctcctgacaggaagaagctgtttagcttg
ttgggaattgatttgactgctcagagtaataacaattcacctagagacagcccttgcaag
gagaacaaaataaagaaacggaaaggtgaagaaataagcagagaagccaaaaaagctcgc
aaaacaggtggccttgcaggtagcagctctgatgagagtgaaagtgagtctgatgcttca
gacaatgaagaaagtgacaacgagagctccaaatttttgagctctggagatgatgatgac
ttcaacccattcagagatgaatccagtgaagatgatgaagatgatccatggttaattaga
aaagagcataaaaaaaataaagacaagaaaaagaagaaaagtatagacccagattctatt
caaagtgccttactagcttctggtctcggatcaaaacgacctagctgtttcacttccact
gttggtaccaccacttctagtaccaacacgtcagcaaacagtaacacaaacagcagcgtc
gtaacaagtcaggatgctgttgaaagggcccaacaaatgaaaaaagaactgcttgataaa
ctggaaaagctggctgaagatctgccacctaatacactggatgagcttatagatgaactg
ggtggtcctgaaaatgttgcagagatgacaggccgcaaagggagagttgtaagcaatgat
gatggcagcatatcttatgagtcaagatctgaactcgatgtgcctgttgaaattctgaac
atcacagaaaagcagaggttcatggatggagataagaacattgccatcatctcagaggct
gccagctctggtatatcattgcaagcagaccgtagagctaagaatcagagacggagagtt
cacatgactctggagttgccatggagcgcagatagagcaatacagcagtttggaagaact
catagatccaatcaagtgactgctcctgagtacgtgttcctaatttctgaattggcagga
gagcagagatttgcatccatagttgcaaaaagactggagagtttgggagccctcacccat
ggtgacagacgagctacagaaactcgagacctcagcagattcaattttgacaacaagtat
ggcagaaatgctttagagattgttatgaaatccattgtgaacttagactccccaatggtc
tcacctcctcctgattttcctggagacttcttcaaagatgttcgtcagggattgattggt
gtgggcttgataaacgtagaagacagatctggaatactaacgcttgataaagattataac
aacatagggaaattcttgaatagaattcttggtatggaagtacatcagcagaatgcttta
ttccagtacttttctgacacgttaaatgcagttattcaaaatgccaagaagaatggaaga
tacgatatgggcatcttagatttgggctctggggatgagaaagtaaggaaggcagacgtt
aagaagtttttaactcccggatattctacctctggacatgtagaactatacacaatcagt
gtagagagaggaatgtcttgggacgaagcaactaagatctgggcagaacagtcgggtcca
gatgatggattttatttatcactacagataagaaataacaagaaaacggctattctagta
aaagaagtgaatcctaaaaagaagctttttttagtatacagaccaaatactgggaaacaa
ctcaaactagaaacatgtgctgacctgaaaaagaaatataagaaggtaccttctgaagat
gctctgccacactggttagagcagtacaattcttccgcggatacctgcacccatgcgtat
tggagaggcaattgtaagaaggcaggcttgggattagtttgtgaagtgggacttcgctgt
cgaacttactacgtcttgtgtggttcagtattgagcgtctggacaaaagtagaaggcgtt
ctagcctctgtgagcggtacaaatgtgaagatgcaaatagtgcgtctaagaacagaagat
gggcagaggattgtaggtttgatcattcctgcaaattgtgtatcgccccttgttaacctc
ctgtcaacgtcagaccagtctcaacagcttgcagtacaacagcagcagatatggcagcag
catcacccgcaaagcatcaccaatttcaacaacgcttaa
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