Phalacrocorax carbo (great cormorant): 104050103
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Entry
104050103 CDS
T08596
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104050103 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104050103 (CSTF3)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104050103 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_19
TPR_16
TPR_6
Motif
Other DBs
NCBI-GeneID:
104050103
NCBI-ProteinID:
XP_009509200
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MAVNRYSRAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQF
PSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEK
MAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMI
NIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQN
TPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYL
EQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHS
IYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY
CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKS
GEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASEL
KALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPPG
LHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKLPDTVDEAVRIITG
GLPEIAVEGNGPVENNAMLNKAVKRPHEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaacagatattcaagagctgctgaatatgtcccagaaaaagtgaagaaagct
gaaaagaaattagaagaaaatccatatgaccttgacgcttggagcattctcattcgagag
gcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcccagttc
cccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaaaattat
gacaaagtggaaaagttatttcagcgatgccttatgaaggttttacacattgatttatgg
aaatgttacctttcctatgtacgagaaaccaaggggaagctacctagttacaaagaaaaa
atggctcaggcatatgattttgctctggataagattggcatggaaatcatgtcataccag
atctgggtggattacatcaattttttgaagggcgtagaagcagtaggatcttatgcagaa
aaccagaggataacagctgtccgtagggtttaccagcgtggttgtgtgaatccaatgata
aacatagaacagctctggagagattataacaaatacgaagagggcatcaatattcactta
gctaagaagatgattgaagacaggagtagagattatatgaatgcacgacgtgtagcaaag
gaatatgagacagtgatgaaaggtctggaccgcaatgctccctctgtccccccacaaaat
accccacaggaggctcagcaggtggacatgtggaagaaatacatccagtgggaaaagagc
aatcctctgcgtacagaagatcaaactcttataacaaaaagagttatgtttgcctatgag
caatgccttttggttctgggacatcacccagatatctggtatgaagctgcgcagtacctc
gagcaatctagtaaactgctagctgaaaaaggggacatgaacaatgctaagcttttcagt
gatgaggctgctaatatttatgaaagagcgatcagcactttattaaagaagaatatgctt
ctttattttgcatatgcagattatgaagagagtcgaatgaagtatgagaaagtacacagc
atatataaccgactcttggctattgaagacattgatcccactctggtttatatccaatat
atgaaatttgcaaggcgagcagaaggcataaaatctggaagaatgatatttaagaaggca
agagaggatgcccggacccgccatcacgtctatgttacagcagctttaatggagtattat
tgtagtaaggataagtctgtggcctttaagatttttgagctagggctgaaaaaatatggg
gacattccagaatatgtactggcgtatatcgactacctttctcaccttaatgaggacaat
aatacaagagttttgtttgaacgtgttttaacttcagggagccttccacctgagaaatct
ggggaaatctgggctcggtttttagcttttgaaagtaacattggtgatctagctagtatc
ctgaaagttgaaaaacggagatttacggcattcaaggaagaatatgagggtaaagaaaca
gctctgctggtggacaggtataagttcatggatttgtacccttgctccgctagcgaactg
aaggcccttggttacaaggacgtctcccgtgccaagctggcagctataattccagaccct
gtggttgcaccttccatcgtgcctgttctcaaagatgaagtagacagaaaacctgaatat
ccaaaaccagacactcagcaaatgattccatttcagccaagacacttagcacctccaggt
ttacatcccgtcccaggcggtgtatttcctgttccaccagcagctgtagttctcatgaag
ctcctgccacctcctgtttgttttcagggtccctttgttcaagtggacgagctcatggag
atatttagaagatgcaaactgccagacactgttgatgaagctgtacgaataattaccgga
ggcctacctgaaatagctgtggaaggcaatggacctgtggaaaataacgctatgcttaat
aaggctgttaagagaccacatgaagattctgacgatgacgaggagaaaggatccgtagtt
ccccctgtacacgacatttacagagcacgacagcaaaagagaatccggtga
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integrated database retrieval system
