Phalacrocorax carbo (great cormorant): 104050322 Help Entry 104050322         CDS       T08596                                  Symbol PBRM1 Name (RefSeq) protein polybromo-1 isoform X1   KO K11757   protein polybromo-1 Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:pcao00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     104050322 (PBRM1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pcao03021]     104050322 (PBRM1)    03036 Chromosome and associated proteins [BR:pcao03036]     104050322 (PBRM1) Transcription machinery [BR:pcao03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      104050322 (PBRM1) Chromosome and associated proteins [BR:pcao03036]  Eukaryotic type   Chromatin remodeling factors    PBAF complex     104050322 (PBRM1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1 DHDPS Motif Other DBs NCBI-GeneID:  104050322 NCBI-ProteinID:  XP_009509435 LinkDB All DBs Position Unknown AA seq 1601 aa AA seqDB search MGSKRRRATSPSSSVSGGDFDDSHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRD YKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLL FNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDNQGANSELSSP GYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQN GTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRI SNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLY DTVRSCRNNQGQLISEPFFHLPSKKKYPDYYQQIKAPISLQQIRTKLKNHEYETLDQLEA DLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSS KRKSKKNIRKQRMKILYNAVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKM IEHNIRNDKYTGEEAMIEDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLAE DDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSR SELPDYYVTIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDAL VLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEXXXX XXXXPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIK IRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDS SGSAGLSSLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLY GCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDE DVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKVDEEKHAE TLEDSKVEESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVR PRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKC AVLSFKDFLSCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRK PIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEMGEEEGDMTETPSMPQLQTPLASEL DIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLV GTEWRNLEATKKAEYEGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMP GIPGIPPPGVIGQNVSPMVGTPAPGASPFGQQIGILGPPGQQAPPPYPGQSPASQPVMQQ PTTPMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRL PSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNIENV NT seq 4806 nt NT seq  +upstreamnt  +downstreamnt atgggttccaagaggcgaagagctacctcgccttccagcagtgtcagtggaggagacttt gatgacagccaccattctacgaatataccaggcccaagcagaaagaggaggagactttcc aatctcccaactgtagatcctattgctgtatgccatgaactttacaacaccatcagagat tacaaagatgaacagggcaggctcctttgtgagcttttcattagggctccgaagcgaaga aatcagccagattattatgaagtggtttctcagccaattgatttaatgaaaatccaacaa aagctaaagatggaagaatatgatgatgtgaatgtgctgactgctgattttcagcttctc tttaacaacgcgaaggcttactataagcctgattcacctgaatataaagctgcctgcaaa ttatgggagttgtatttgcgcacaaaaaatgaatttgttcaaaaaggtgacgctgaagag gaagatgaagatgaggaaggacatgacaatcaaggcgcaaattctgaattatcatctcca ggttacctgaaggaaattcttgaacagcttcttgaagctgtagctgttgccacaaaccca tcaggacgtctcataagtgaactgtttcagaaacttccttctaaagtgcaatatccagat tattatgcaataataaaggagcccatagatcttaaaactattgcccaaaggatacagaat ggaacttataaaagcattcatgcaatggccaaggatattgatcttctggcaaagaatgcc aaaacctacaatgagcctggatcacaagtattcaaggatgcaaatgcgattaaaaaaata tttaatatgaaaaaggctgaaattgaacacagtgagttggccaagtcaagtctccgaatc agtaacaaaaggtcagcccaaggggatcgtttatcagcaataactatggcattgcagtat ggatcagaaagtgatgaagatgcagctttggctgctgctgctcgttatgaagaaggagaa tctgaagcagagagcattacttcctttatggacacttctaatcctctttatcagctttat gacacagttagaagttgccgaaataatcagggccagctaatatctgaaccctttttccac ttgccctccaagaaaaagtatcctgattattatcagcaaattaaggcacctatttcactg cagcagatcagaaccaaactgaagaaccatgaatatgaaactttagatcagttggaggct gatctgaacttgatgtttgaaaacgccaagcgctacaatgttcccaattctgccatctat aagagagtactgaaaatgcagcaggttatgcaggcaaagaagaaggagcttgcaaggaga gatgacatcgaggatggggacagtatgatttcttctgctacatctgatactggaagttca aagaggaaaagtaaaaagaatatacgaaagcaaagaatgaagatcttatataatgcagtt ctagaagctcgagaaccaggcacaggcaggcggctctgtgatctgtttatggttaagcca tccaaaaaggactatccagactactataaaattatcttggagccaatggacttgaaaatg atagaacacaacatccgcaatgataaatacacaggggaagaagccatgattgaagacatg aagctcatgttccgcaatgcaaggcattataatgaggaaggctcccaggtatacaatgat gcccatatgctggaaaagatccttaaagaaaaaaggaaagaacttggacctctagctgaa gacgatgatgttgcatcccctaaactaaagctaagtagaaaaagtggcatttctcctaaa aaatctaaatacatgactccaatgcaacagaaattgaacgaggtgtatgaagcagttaag aattacacggataaacgaggcaggcgtctgagcgccatcttcttgaggctgccatctcgg tctgaacttcctgactattatgttaccattaaaaagcctgttgacatggaaaagatcaga agtcatatgatggcaaataaataccaggatattgattccatggtagaggactttgtaatg atgttcaataatgcttgcacatataacgagcctgaatctttgatttataaagatgctctg gtcctgcataaagttttgcttgaaactcggagagaaatagaaggagatgaggattctcat gtgcccaatgtcactttgctaattcaggaactcatccataacctttttgtatctgtgatg agccaccaggatgatgagggcagatgctacagcgactccttagctgagnnnnnnnnnnnn nnnnnnnnnnntcctctgacttttgatattatccgcaaaaatgttgaaaataatcgctat agaagattggacttgttccaggagaatatgtttgaggtactggagagggcaaggagaatg aacaggactgattcggagatctacgaggatgcagttgaacttcagcagttctttattaaa attcgagatgaactttgtaagaatggagagattcttctgtcacctgctctcagctatacc actaagcatcttcacaatgatgtagaaaaggaaaagaaggaaaagctgcccaaagaaata gaggaggataagctcaaaagagaggaggagaagagagaagctgaaaagagtgaagattct tctggatcagctggactgtcaagcttgcatcggacctacagccaggattgcagcttcaag aacagcatgtaccatgtaggagattatgtgtatgtggagcctgctgaagccaacttgcaa cctcacatagtctgtattgagaggctgtgggaagattcagctggagagaaatggctctat ggctgttggttttatcgaccaaatgaaacgtttcatcttgcaacacgaaaattcttggag aaagaagtttttaaaagtgactattacaataaagttcctgttagcaaaattttaggcaaa tgcgtggtcatgtttgttaaggaatattttaaattgtgtcctgaaaacttcagagatgag gatgtctatgtctgtgaatcacgttattctgcaaagacaaaatcttttaaaaagattaaa ctgtggactatgcctgtaagctctgtaagatttgtcccacgagatgtacccctgcctgtg gtccgtgttgcttctgtgtttgctaatacagacaaagtagatgaggagaaacatgctgaa acattggaggacagtaaggtggaagaaagtatccttcatcttgaaaaggacaaagaagat gttccggtagaaatgtccaatggagaacctggttgccattattttgaacagctctgctac aatgatatgtggcttaaggttggggactgtgtcttcataaaatcacatgggttagtgcga cctcgggtcggaagaattgaaaagatgtgggtccgagatggagctgcatatttctttggt ccaatctttatacatcctgaagaaactgaacatgaaccaactaaaatgttctacaagaag gaagtgtttttgagtaacttggaggagacctgtccaatgacttgcattttgggaaagtgt gcagttctgtcattcaaagacttcctgtcctgcagaccaacagaaatctctgaaaacgat gtttttctttgtgagagccgctacaatgaaagtgacaaacagatgaagaaatttaaaggg ctgaagaggttttcactctctgcaaaagtggtagatgatgaaatatactattttagaaaa cccatagttcctcagaaggaaccatctccactactggaaaagaagattcagcagctagaa gcaaaatttgctgagttggaaggtggtgatgaagacatggaagagatgggagaagaggaa ggtgacatgactgaaacaccttctatgcctcagcttcagaccccactagctagtgaattg gatataatgccttatactccaccacagtccactccgaagtctgttaagggcagcaccaag aaggagggatcaaaaaggaagatcaacatgagtgggtacatcttatttagcagcgagatg agagctgtgattaaagctcagcacccagactactcctttggagagctcagcaggcttgta ggaactgaatggagaaacttggaagcaacaaagaaagcagaatatgaaggcatgataagt ggctatccaccggtgctgccacctttgcagggcccagttgatggcattgttagcatgggc agcatgcagccacttcacccaggggtgcccccgccccaccaacttccgccaggtatgcca ggcatcccaggcatcccaccacccggtgtaataggccaaaacgtgtcccccatggtaggc actccagcacctggagcaagtccttttggacagcagataggaatccttggcccgccggga cagcaggcacctcctccgtatcccggccagagcccagcaagtcagccagttatgcagcag cccacaactcccatgttcgtctcccctccaccaaagacacagaggcttcttcattctgaa gcctatctgaaatatattgaggggcttagtgctgaatcaaatagtattagcaagtgggac cagacccttgcagcacgaagacgagatgtccacttatcaaaagaacaagagagccgactc ccttcacactggttgaaaagtaaaggggctcataccacaatggctgatgcgttatggcgt ctgcgagacttgatgctacgagacacccttaatatccgtcaggcgtacaacatagaaaat gtttag

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