Phalacrocorax carbo (great cormorant): 104050323
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Entry
104050323 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5-like
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104050323
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104050323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
DUF1087
Helicase_C
CHDCT2
ResIII
DEAD
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
104050323
NCBI-ProteinID:
XP_009509437
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
ELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQL
EGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWE
REFEMWAPDFYVVTYTGDKESRSIIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTS
YELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEE
LFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTE
LIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVE
APVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDQGRLALQMTKMLDLLEDFLEYEGXDGG
ITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR
AHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDIL
KFGTEELFKDDVEGMVSQGQRIGMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKD
VDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREI
IKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDN
QSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGSLQVLGFNARQ
RKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFAD
GVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPN
TPVPASPAHMHTAPVAPADKTEVQLGFQEEKDQVEQKSRKVSESQVPASAEKVESEEHPE
SCDSKEKLGEEKQEESERAEPSPEPLVKDEAIQEKPLEKPELNSSPGKGDDKEVKPEDSK
AEQKEQGEAQQNGDKEEEEDGKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAVSSGK
IYDIWPRRHDYWLLAGIVTHGYARPQG
NT seq
3322 nt
NT seq
+upstream
nt +downstream
nt
ggagctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaaaa
gctgaaagaggagaagctggaaaagcctccagaaacgcctctggtggatcctacggtgaa
gtttgacaagcagccgtggtacatcgatgctacaggaggcacgctccatccttaccagct
ggaagggctaaactggctgaggttttcctgggcccaagggacggatacaatcctggccga
cgagatggggctggggaagactgtgcagactattgtgttcttgtattccctgtacaagga
gggccactcgaaagggccgtatctggtcagcgcccctctctccacgatcatcaactggga
gcgcgagtttgagatgtgggcacctgacttctatgttgtgacctacacgggggacaaaga
aagccggtcgatcatccgggaaaatgagttttcttttgaagacaacgccatccggagtgg
aaagaaggtcttccggatgaagaaggaagcccagatcaagttccatgtcctgctcacctc
ctacgagctgatcactattgaccaggcagtgctgggctccatagagtgggcctgtctggt
ggtggatgaagcacacaggctgaagaacaaccagtccaaattcttcagagtattaaatag
ctacaagatcgattacaagctgctgctcaccgggactccactccagaacaacttggaaga
gcttttccacctgctcaatttcctgactcctgagaggtttaataacctggaggggttcct
ggaggagtttgcagacatctccaaggaggaccagatcaaaaagcttcatgatctgctggg
tccccacatgctgcggcggctcaaggcagatgtgttcaagaacatgccggccaagacgga
gctgattgtgagagtggaactgagccagatgcagaagaagtactacaagttcatactgac
gaggaattttgaagccctgaattcaaaaggtggtgggaaccaggtctcgctgctcaacat
catgatggacctgaagaagtgctgtaatcacccgtacctctttcctgtggcggcggtgga
ggccccggttctgcccaatggatcctatgatgggaattctttggtcaaatcatctgggaa
actgatgctgctccaaaagatgctgaagaagctacgggaccagggtcgccttgccctgca
gatgacgaagatgctggacttgctggaggatttcctggagtacgaaggantagacggggg
catcaccggcggcctgcgccaggaggccatagacaggtttaacgctcctggtgctcagca
gttctgctttctcctctctacccgtgctggtggtctgggcataaaccttgctacggccga
cacagtcattatttatgattctgactggaatccccacaatgacatccaggcgttcagcag
agctcaccgcatcgggcagaacaagaaggtgatgatctaccgctttgtgaccagagcctc
tgtggaagagcgcatcacccaggtggccaaaaggaagatgatgctcacccacctggtggt
ccgcccggggcttggctccaagtcgggctccatgaccaagcaagagctggatgacatcct
caagtttgggacagaagagctcttcaaggatgatgtggaaggcatggtgtctcagggaca
gcggatcggcatgccggatgctgtcacccctttctctgacacactgtcaaccaaaggggg
tgcagtgactcccggcatgaaaaaaaagcatggtggcaccccacctggtgacaacaagga
cgtggatgacagcagtgtgatccactacgatgatgctgccatctctaagcttctggaccg
aaaccaggatgcgactgatgacacggagctgcagaacatgaacgagtatctcagctcctt
taaagtggcccagtatgttgtgagagaagaggatggtgtggaagaggtggaacgtgagat
catcaagcaggaggagaatgtggaccccgactactgggagaagctgctgcggcaccacta
tgagcagcagcaggaagatctggccaggaacttggggaaagggaagagaatccgcaagca
agtcaactacaacgatgcctcgcaggaggaccaagagtggcaggacgagctctctgacaa
ccagtcggagtactccattggctctgaggacgaagacgaagactttgaagagaggccaga
aggtcagagtggcagaagacaatcccggagacagctgaagagtgaccgggacaaacctct
ccctcctttgctagcaagggttgggggctccctgcaggttctcggcttcaatgcccgcca
gcgcaaggctttcctgaatgctatcatgcgctggggcatgccgccccaggatgccttcaa
ctctcactggctggtccgggatctgcgagggaagagtgagaaggagttcagggcatacgt
ctctctcttcatgaggcatttgtgtgaacccggggcagatggtgccgagacctttgcgga
tggcgttccccgggaagggctgtcacggcagcacgtgctgactcgcataggagtcatgtc
gctagtaaggaagaaggtacaggagtttgagcatgtcaatggcaagtacagcaccccaga
tctgattctcgagggcccggagagcaagaagtccagcgagattgtgtcttcagatcccaa
cactcccgtcccggccagcccagcccacatgcacacggcacctgtggcccctgcagacaa
gacagaagtgcaacttgggttccaggaggaaaaggaccaagtagagcagaagtccaggaa
ggtgtctgagagccaggtgcctgcgagtgccgagaaggtggaaagcgaagagcacccaga
aagctgcgacagcaaagagaaactgggggaagagaagcaagaggagagtgaaagggctga
gccttctcctgagcctctggtgaaagatgaggcgattcaagagaagcctttggagaagcc
ggagttgaacagtagcccggggaaaggggatgacaaagaagtcaaaccagaggattccaa
ggcggagcagaaggagcaaggtgaggctcagcaaaatggtgacaaagaggaagaggagga
tggaaagaaggatgacagaaacatgaacttccgattcatgttcaacattgctgacggtgg
ctttacagagctgcacacgctgtggcagaacgaggaaagggctgctgtctcctccggcaa
gatctacgacatctggccccgccgacacgactactggctgttggccggaattgtcactca
cggctacgcccgcccgcagggc
DBGET
integrated database retrieval system
