Phalacrocorax carbo (great cormorant): 104050329
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Entry
104050329 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: thyroid receptor-interacting protein 11-like
KO
K23368
thyroid receptor-interacting protein 11
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104050329
Membrane trafficking [BR:
pcao04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
104050329
Retrieval pathways
104050329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
DUF3138
Motif
Other DBs
NCBI-GeneID:
104050329
NCBI-ProteinID:
XP_009509442
LinkDB
All DBs
Position
Unknown
AA seq
1902 aa
AA seq
DB search
AATELHVSNSRLREIESINATQKLENERLKKVCSDLEEKHEAAELQIKQLSIEYRNQLQQ
KEVEISHLKARQNALQEQLRKVQAAAQSAQLGAGVLPPTSTSASYVPVVRHSSGFEGDDM
DFGDIIWSQQEINRLSNEVSRLESEVDHWKQIALSSKVQGTNDAEQSEICKLQNIVKELK
QNLSQEIDEHQHELSVLQDAHRQKLIEISRRHREELSEYEERIEELENWLQQDGVSADAV
DDSKISEQKNNAQSLGGKVEELQVVNDLEDEIRKLNHKLSSAKEENKNLLKEQELAKLEK
IQIMQEYESLKSDFSMLQSSVAEQGAFLKEQEEKLQSKTSLPDDVVRLQQALLEAGNEIA
RLSSLNQGLEKEMTSAQHKNETILSAYTEDQNSELSQLRQDLERKEHELNESIAERETLI
AELEELDKQNQEATQHMITLKEQLSKQNTETDSIIKQLKCDIDFERKKVSVLESEMMETV
KELNSQTEKLSQCSYALNDLHISKQQLQDNIKDLQEQLRKAWDCNLHNKKEIGELQQKLK
EREEELSVSLSKLTEKSNRESNYTCQDQVLKEREVEIAKLQNDISENKQLNEDLEKSLSN
LRTENGKLIAATEKLKQELSDAISEKSKVYLEKDTVLEALKMEKRQLESELNQMEKRLLE
QAHKYKQTIEELSNARSMDTTALQLEHERLVKLNQEKDFKIAELKRSIEQMEIDHQETKE
MLTTSLGGQKQLTELVKEKELFIEKFKNQALQVKQKLEEYIEVSKKQAVLKQNLEEKDRS
LAVMKEENNHLKEEIERLKDQQSRSTPMVEPKTLDIIIELESEVTQLKVIKNNLEEEIEV
HKKTIEDQNQTTAQLQQSLQEQRKEIDESKFQCEQMNVTHERLSLEKDEEIKNLQKTIEQ
IKTQLHKERQIIQTDSSDLFQETKVQTLNGENGNEKHDLSKAEIERLVKGIKEREMEIKL
LNEKNVSLSQQIDQLSKDEVGKLTRIIQEKDLEIQALNARVSSAAYRQDVLSLQQQLQAY
VMEREQVLAVLSEKTRENSQLKTEYRNIMDMVAAKEAALVRLQEENQKLCNRSENSSQDM
SRETIQNLSRIIREKDIEIDALSQKCQTLLTVLQTSSTGTDNGSGGVNSNQFEELLQERD
KLKQQVKKMEEWKQQVITTVQNMQHESVHLQEELHKLQAQISVESDSNSKLQVDYNGLIQ
SYEQNEKKLKSFSQELAQVQHSIGQLHNTKDLLLSKLDLVTPSVAAASTISQFSGIQCSA
PEVLSDESKLLQKELEQLKKKLQEKDTTIRTLQENNQRLSDSVATASEIERKSQEGTESE
MRQIKEKHDVLQKSLREKDILIKSKSDQLLSVSENLSNKENENELLKQAVTNLKERNLIL
EMDIRKLKXXXXXXXXXEKETEFRALQETNMQFSMMLKEKEFESHSMKEKAFAFEKLLKE
KEQGKTGELNQLLNEVKSMQEKAVTFQQERDQVMVALKQKQMESSALQSEVQHLREKEQR
LNQELERLRNHLLEMEDSYTREALAAEDREVKLRKKVLILEEKLVSSSTAVENASHQASL
QVESLQEQLNLVSKQRDETVLQLTISQDQVKQYALSLANLQMVLEQFQQEEKAMYSAELE
KHQKQTAEWRKKAESLEEKVVSLQESLGEANAALDAASRLTEQLDIKEEQIEELKKEGEI
RREMLEDVQNKLMNLMNSTEGKVDKLLMRNLFVGHFHTPKNKRPEVLRLMGSILGIKKEE
LDQLLSEDQRGVTRWVTGWLGGGAGSKSVPSTPLRPTHQNIFNSSFSELFVKFLETESCP
SLPPPKLSVHDMKPLGAAGTGNTSSTPFNSQIQDSAVLGMSRRPDTNPFLAPRSAAVPLI
TPAGSSGHLLMKPISDALPTFTPLPVSPDASAGAVLKDLLKQ
NT seq
5711 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacagaactccatgtgtccaattcaagactcagagaaatagaaagtattaatg
ccacacaaaagcttgaaaacgagaggctgaaaaaagtttgtagtgatttagaagaaaagc
acgaagcagcagagcttcaaataaagcagttatctatagagtaccgaaatcagcttcaac
agaaggaggtggaaatcagccatctaaaagctagacagaatgcactacaggagcaactgc
ggaaagtacaggcggctgctcagtcagcgcagttgggagctggtgttttgccaccaacct
ctacatcagcttcctatgttccagtggttagacactcctcaggttttgaaggagatgaca
tggattttggagatataatctggtcacaacaagaaataaacaggttgtccaatgaagttt
ctaggcttgaatctgaggttgaccactggaagcaaattgctctgtcttccaaagtgcagg
ggacaaacgatgctgaacaaagtgaaatatgcaaactgcaaaatattgttaaggagctca
aacagaatttaagtcaagaaatagatgaacatcaacatgaactttcagtattgcaagatg
cacacaggcaaaagctaatagagataagtcgtcgacaccgagaagagctgagtgaatatg
aagagagaattgaagaacttgagaattggttacagcaagatggtgtgagtgccgatgccg
tggatgactctaaaattagtgaacagaaaaacaatgcccagagtctaggaggaaaagtag
aagagttgcaggttgtaaatgacctagaggatgaaataagaaaattaaatcacaaattgt
cttctgccaaagaagaaaacaaaaatctcctgaaagagcaagagttggcaaagttagaaa
aaatccaaataatgcaagaatatgaaagtcttaaatctgacttcagtatgcttcagagtt
ctgttgcagaacaaggtgctttcctgaaagaacaggaggagaagctccaatcaaaaacat
ccctaccagatgacgtcgtcagactacagcaagcactcttagaagcaggaaatgaaatag
caagactttcaagtttaaatcagggacttgagaaggaaatgacaagtgcacaacataaaa
atgagactattctttctgcatatactgaggatcagaattctgaattaagtcagttaaggc
aagatttggaaaggaaagaacatgaattaaatgaaagtattgctgaaagagaaacgttaa
tagcagagttggaagaactagacaagcagaatcaagaagctactcagcacatgattacac
tgaaagagcagctgtcaaaacaaaacacagaaactgatagtatcatcaaacagctgaaat
gtgacatagattttgaaagaaagaaagtgtcagtattggaatctgagatgatggaaactg
ttaaggaattaaatagtcagaccgaaaaactaagccaatgttcatatgcacttaatgatt
tgcatataagtaagcagcagcttcaagataatattaaagatcttcaggaacaattaagga
aagcctgggactgtaatttgcataataaaaaagaaattggagaactgcagcagaagctaa
aagaaagagaggaggagctttctgtatccttgagcaagttaacagaaaaaagtaatcggg
aatctaactacacttgtcaagatcaagttctgaaagaaagagaagtagaaattgcaaaac
tacagaatgacatttcagaaaataaacaactaaatgaagacttagagaaatctctgtcta
atctcagaacagaaaatggaaagctgatagcagcaactgaaaaactaaagcaggagttaa
gtgatgccatttctgagaaaagtaaagtttatttggaaaaagacactgttttggaggctt
tgaaaatggaaaaaaggcagttagagagtgaattaaaccagatggaaaagaggcttttgg
aacaagcacataagtacaagcaaactattgaggaattatcaaatgctcgtagtatggata
ccactgcattgcagcttgaacatgagcgcctagttaaactcaatcaagagaaagacttta
agattgctgaacttaaaaggagcattgagcagatggaaattgaccatcaagaaacaaaag
agatgttgactactagcttaggaggacaaaagcagttgacagaactcgtaaaagaaaaag
agctatttattgaaaaatttaaaaatcaagccttacaggtgaagcagaaacttgaggaat
atatagaagtttcaaaaaagcaggctgtcttaaaacagaacttggaggaaaaagacagaa
gtcttgcagtcatgaaggaagaaaataatcatttgaaagaagaaattgaacgccttaagg
atcagcaaagtagatctacgcctatggttgagcctaaaactttagatattattattgaac
ttgaaagtgaggtaacgcagttaaaagtgataaagaataatcttgaagaagaaatagaag
ttcacaaaaaaacaatagaagatcagaatcaaacaacagcgcaacttcagcagtctttgc
aggagcagagaaaagaaatagatgagtctaaatttcagtgtgagcaaatgaatgtcacac
atgaaagactttctttagagaaagatgaggaaataaaaaatttgcagaagacaattgaac
aaattaaaactcagttgcacaaagagagacagattattcagactgattcctctgatcttt
ttcaggaaaccaaagttcagactcttaatggagaaaacggaaatgaaaaacatgacctat
ctaaagctgaaattgagagactggtaaaaggtatcaaagaaagggagatggagattaagc
ttctaaatgaaaagaatgtttcactaagtcagcaaatcgatcagttgtccaaggatgaag
ttggcaagcttactcgcatcattcaagagaaggatttagaaatacaagctctcaatgcta
gagtttcctcagctgcctataggcaggatgttctttctcttcagcagcagctgcaagctt
atgttatggaaagagaacaagtactagcagttctaagtgaaaagacaagagaaaacagtc
agttaaaaacagagtatcgtaatatcatggatatggtcgctgctaaagaagcagctttgg
taaggttgcaagaggagaatcaaaagctatgtaacagatctgaaaacagcagtcaagaca
tgtctagagaaactattcagaatctatcccgtatcattcgagaaaaagatattgaaatag
atgctctaagtcaaaaatgccaaacattattgactgtcttgcagacatccagtacaggta
ctgataacgggtcaggaggtgttaacagtaatcagtttgaggaacttctacaagaacggg
ataaactaaaacagcaagtaaaaaagatggaagagtggaagcaacaagtaataaccacgg
ttcagaacatgcagcatgagtcagttcacctccaagaagagttacacaagcttcaagcac
aaatttcagttgaaagtgatagtaattcaaagttgcaggtagattataatggcttgattc
agagttacgaacagaatgagaaaaagctgaaaagttttagtcaggaattagcacaagttc
aacacagcatagggcagcttcataacaccaaggatcttctcctgagtaaacttgatttgg
taacaccctctgtggcagcggcttccaccatttcacagttttcaggcattcagtgcagtg
ctcctgaagtactcagtgatgaatctaaactccttcagaaggagttggaacaactgaaaa
aaaaactgcaagaaaaagatacaactattaggactcttcaggaaaacaaccaacgattat
ctgattctgtggctacagcatcagagatagaaaggaagagtcaagaagggactgaatcag
agatgaggcagatcaaagaaaaacatgatgtcttacagaaatcacttagggaaaaagaca
tattaattaaatctaaaagtgatcagttactttctgtgagtgaaaatcttagtaacaaag
aaaatgaaaatgaacttttgaagcaagctgtgactaatcttaaagaaagaaatttaattt
tagaaatggatattcgaaaactgaaangannnnnnnnnnnnnnnnnnnnnnnngaaaaag
aaacagaattccgagcgcttcaggagaccaatatgcaattttcaatgatgctgaaagaga
aagaatttgagtctcactcaatgaaggaaaaagcttttgcttttgagaagctgttgaaag
aaaaggaacagggcaagacaggagaattgaatcaactgttaaatgaagttaaatcaatgc
aggaaaaggccgttacttttcagcaagagagagaccaagtcatggtagcacttaaacaga
agcaaatggagagcagtgccctgcagagtgaggtacagcatttgcgtgagaaagagcagc
gcctaaatcaggaactggagaggttacgtaatcacctgttagaaatggaagactcctaca
cacgagaagctttagctgcagaagacagagaggtcaagctaagaaagaaagttttgattt
tggaagaaaaacttgtctcctcatctactgcagtggagaatgccagtcaccaagccagtc
tgcaggttgaatctttgcaagagcaactaaacctggtttccaagcagcgagatgaaactg
tgctacagctcaccatctcccaggaccaagtgaaacagtatgcattgtcactggccaacc
tgcagatggtactagagcaattccaacaggaagaaaaagctatgtattcagcagagctgg
agaaacaccaaaaacagactgcagaatggaggaaaaaagcggaaagcttagaagaaaaag
ttgtatcactgcaggaaagtttaggagaagcaaatgctgcactggatgcagcctcgaggc
ttaccgagcagcttgacatcaaagaggagcagatcgaagagcttaagaaagaaggtgaga
tcagaagagaaatgctagaagatgtacaaaataaactaatgaatcttatgaacagcacag
aaggaaaagtggacaagctcctgatgagaaatctctttgttgggcattttcatactccaa
aaaataaacgtcctgaggtgttaaggttaatgggaagtattttaggaataaaaaaggaag
aacttgatcagttattgtctgaagaccaaagaggagtcacaagatgggtgactggctggc
ttggtggaggagctgggtcaaagagtgtccctagtacacctttgaggccaactcatcaga
atatttttaatagttctttttcagaattgtttgtgaaattcctcgaaacagagtcttgcc
caagccttcctccacccaagctctctgttcatgatatgaaacctttaggagcagcaggaa
cgggtaacactagcagtactccattcaacagtcaaatacaagattctgcagtcttgggaa
tgagcagaagaccagatacaaacccatttttagcacctcgatctgccgcagtgcctctca
taacacctgctggtagttctggccatctgcttatgaaacctatttctgatgcattgccta
cttttacaccgctgccagtgtcccctgatgccagtgctggtgctgtactaaaagacctcc
taaaacaatag
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integrated database retrieval system
