Phalacrocorax carbo (great cormorant): 104050439
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Entry
104050439 CDS
T08596
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104050439
Enzymes [BR:
pcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104050439
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104050439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
DEAD
ERCC3_RAD25_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
104050439
NCBI-ProteinID:
XP_009509589
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MEVLVLEIEDPGCFWVTMKGRGPYIVDETEYKNLNAEMNQFYDKSYKDVDEVKPVTVEEG
QVCVVFSEELKCWCRAVIKSIMYCTDHYKTECFLVDYGKYIFVKSKDIRVALEAFMQIPY
RAKRCRLYRTKPVTLRIDFYEDTAKIVPAKRWDSAATRYFQNLLKATTQMKAKLCAIEDN
TFDVFLYVTIKDEKVCVNDDLVSKNFARFEEAKENTGSFTDYQESETSLNAESLPVKTLN
PALAFRPVIFQEKISTNLETGLAASSSFLEETYQKSSTDLIESTAPIVKAIPGLSFKENT
AVHTDRLQQFLNSVPLKTHIVEDDQQSFQNLSEERNFVFLSNKIEPSSVLETAPLFDDLK
KELTWKKFSGPDFTESYCWPPVARGCDVVAISYQGNDPFLYIPPVLTFLQSGSCYKALPN
RSGPLALILCPGWKKAQLVFELLKTYERCSRQLHPMLIILGQNKEEGRHVKIRGCEVIVT
TPYSLLRLFEHHSLLFCRLCHLVLDEIEVLFSDASEQVFTILDCYKKAIITEEWEYSPHQ
IIAAGTRWNKHIARLIKEFMNDPYIVITAMEEASIYGNVQQVVQPCMNSERTAVLLKILD
FTCNNLQKVLVFTNSVNEAEMVHKVLKSNSIFALKIHKESEFNFKYILEQWTKNSSGTHV
VLVLTDDCMHSLGITDATCVIHFSFPSPRIFGQRLHSLSDNFCNLIKDSSVDQEYTKARS
VILLTESSACHALGILRYLQHAEAEIPPELQDFTAKMLEAEEDKKSSRPLCAYLKTFGIC
KNRTVCPDRHQINLQIDVPQNIPDKIIQMPGCVTVLPLHIVNATNYFGRIVDKQKDQYTI
LAEEINEYFKKPSNKISVKNVEKLAFYGLHEKTLFHRVQVVEISTKEEESLFFNVKIKYI
DEGRTNQVQSYQLLHLPARFQCLPPQAVEFVVCRVKPIDNEIEWNPKVTHYINHKIKGKL
HEAKIVHILGNTAWVDPMVRVTRLSDLKTSINEYNVRSEILATGLGTDNPEHVMQLQKLC
GHMKVLDHAKKLEP
NT seq
3104 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttggtattagagattgaagatccaggttgcttttgggttactatgaaagga
cgcgggccttacatagtcgatgaaacagaatataaaaacctgaatgctgaaatgaatcag
ttctatgacaaatcttataaagatgtggatgaagtaaaaccagtaacagtagaagaaggc
caggtttgtgtggtttttagtgaggaactcaaatgctggtgtagagcggtgattaaatca
atcatgtactgtacagatcattataaaacagaatgttttcttgtggattatggcaaatac
atttttgttaaatcaaaggacattcgggttgcactggaagcatttatgcagatcccatat
agagcaaaaaggtgtaggctgtatcgcacaaagccagtgacattgcgtattgacttttat
gaagatactgcaaaaatagtaccagccaaaagatgggatagtgctgctactcggtatttt
caaaaccttctcaaagcaaccacccaaatgaaagccaagttatgtgccatagaagataac
acatttgatgttttcctttatgtgacaataaaagatgaaaaggtatgcgtcaatgatgat
cttgtctcaaagaactttgcgcgttttgaggaagctaaagagaatacagggagttttacg
gattatcaggagagcgaaacatcgctaaatgctgagtctcttccagtgaaaactcttaat
cctgcgcttgctttcaggccagtgatatttcaggagaagatatcaacaaatcttgaaaca
ggtcttgctgcttccagttcctttcttgaagagacataccagaagtcaagcacagatcta
attgaaagtactgctcctattgtcaaagcaattccaggtttgtctttcaaggaaaataca
gcagttcacacagacaggcttcagcagttcttaaattctgttcctctgaagacacacata
gttgaagatgaccaacagagttttcaaaatcttagtgaagaaagaaactttgtctttctt
agcaacaaaattgagccatcatcagttctggaaacagcaccactttttgatgatctgaaa
aaggaacttacttggaaaaaattttcaggccctgacttcacagaatcttactgttggcca
ccagtagctcgaggatgtgatgtagttgccatctcatatcagggaaatgatcctttttta
tatattccaccagttcttacatttttgcagtcgggaagctgctacaaagccttgccaaac
aggagcggaccactagcacttattttatgtcctgggtggaagaaggcacaacttgttttt
gagctactgaaaacatacgagagatgctccagacagcttcatcctatgttgataatactt
gggcagaacaaagaagaaggtagacatgtgaaaatacgaggatgtgaagtaattgtgact
acaccgtatagcctcctgagactgtttgaacatcacagtttattattttgtaggctttgt
catcttgttcttgacgagattgaggtgttgttctctgatgcttctgaacaggtttttact
atattagattgttacaagaaagccattattactgaagagtgggagtattcaccacatcag
attattgctgctggaactcgttggaataaacatatagcacgcttgataaaggagttcatg
aatgatccttacattgtgataacagctatggaagaagcttctatctatggaaacgtgcaa
caggttgtgcaaccttgcatgaacagtgagagaactgctgtgttactcaaaatactagat
tttacctgcaataatcttcagaaggtgctggtatttactaattcagtaaatgaagcagaa
atggttcataaggtactgaagagcaattcaatatttgccttgaagatacataaagagagt
gagtttaatttcaagtatatcttagagcagtggacaaaaaatagttctggcactcatgtc
gtactagttttaacagatgactgcatgcactctttggggattacagatgcaacttgtgtg
atacatttcagttttccttctccaagaatctttggtcaacgtctacacagcctgtctgac
aacttctgtaatttgataaaggattcttctgtagatcaggaatatacgaaggcaaggtca
gtcattttactaacagaaagcagtgcatgtcacgcacttgggatcctgcgctatttgcag
catgcagaagctgaaattccaccagaactgcaagattttactgccaagatgctagaagct
gaagaggataagaaatcttcaaggccactgtgtgcctatcttaaaacatttgggatttgc
aagaatagaacagtgtgtccagatcgtcatcaaattaatttacaaatagacgtgcctcag
aatataccagataaaattatacaaatgcctggatgtgtgacagtactgcctctccacatt
gtaaatgcaacaaactacttcggtcgaatagtagataaacagaaggaccaatatacaatt
cttgctgaagaaattaatgagtattttaagaaacctagtaataaaatttctgttaaaaat
gtggagaaactagcattttatggattacatgagaaaacactttttcacagggttcaggtg
gtagagatttctacaaaagaggaggaaagtttattctttaatgtcaaaattaaatatata
gatgaaggcagaacaaatcaagttcagagctatcagctgcttcacttacctgcaaggttt
cagtgtcttccacctcaggctgtggaatttgtagtttgtagagtgaaacccattgataat
gaaattgaatggaacccaaaggtaactcattatattaatcacaaaattaaaggaaaactc
catgaagcaaaaatagtacatatcctgggaaatacagcttgggttgatccaatggtccgg
gttaccaggctctcagatttgaagacatctatcaatgaatacaatgttcgatctgagatt
ttggctacaggtctgggaactgacaatccagaacatgtaatgcaacttcagaagttgtgt
ggacacatgaaggtattggatcatgctaagaagttggagccttt
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