Phalacrocorax carbo (great cormorant): 104050548
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Entry
104050548 CDS
T08596
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104050548 (TMC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcao02000
]
104050548 (TMC1)
03037 Cilium and associated proteins [BR:
pcao03037
]
104050548 (TMC1)
Transporters [BR:
pcao02000
]
Other transporters
Pores ion channels [TC:
1
]
104050548 (TMC1)
Cilium and associated proteins [BR:
pcao03037
]
Other cilia and associated proteins
Stereociliary proteins
104050548 (TMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
COX16
SpoIIIAH
Na_K-ATPase
Seadorna_VP11
PFF1_TM
UPF0542
Motif
Other DBs
NCBI-GeneID:
104050548
NCBI-ProteinID:
XP_009509723
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
EAQLFVEKFEGALGKGKGKKFYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESHF
GSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGKPYGSLPRKTVPRAEEASAMNFA
TLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRMPLSYFLVGVGTIGYSFMIVIRTMARNAN
EEGGGDDTSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAIVEEQESRKEENIHLT
RFLRVLANFLALCTLAGSGYLIFFVVRRSQKFALEGLENYGWWERNEVNMVMSLLGMFCP
TLFDVISSLENYHPRIALRWQLGRIFALFLGNLYTFIIALMDEINLKLEEEKIVKYNMTI
WEASLYNGTIPENSTAPPIQVDPADVPRGPCWETMVGQEFVRLTVSDTMTTYITILIGDF
LRAVFVRFFNYCWCWDLEYGFPSYSEFDISGNVLGLIFNQGMIWMGSFYAPCLPAINVFR
LHTSMYLQCWAVMCCNVPQERVFKASRSNNFYMAMLLFILFLSTLPAVYTIVSIPPSFDC
GPFSGKTRMFEVISETLEHDFPSWFGKVFGYASNPGLILPFILLMVLSIYYLNATSKSYK
EANLELKKKLQSQAEENKRRNKQKAQKSNEHEENPFETEPPQPKQKSGKQDKSIPNQDNK
KGQGGNEAKKTGQPQEASSSQALQHLDPAPNGHHAPQSRGGNLSPPSIAVTRPPGPRGYG
VLGYPPGNLRFPRAQPETPRAPPSYR
NT seq
2242 nt
NT seq
+upstream
nt +downstream
nt
ggaggcccagcttttcgttgaaaagtttgaaggtgctcttggaaaaggaaaaggaaaaaa
attctatgcatacaaagtgatgatgaccaagaaatggatgaaatttcaaagagattttga
gaattttaagacagcctgcataccctgggaaatgaaaatcaaggagattgaaagtcactt
tggctcatcagtagcatcttatttcatattcttgcgctggatgtatggaataaacatgat
tctctttggactgacatttggacttgtaatggtgcctgaggctttgatggggaagccata
tggctctttacctagaaaaactgtcccaagagctgaagaagcaagtgctatgaactttgc
tactctctgggattttagtggctttgcacagtattctgtactcttctatggttattacaa
taaccagaggacaattggatggctcaagtttaggatgcctctttcatatttccttgttgg
agttgggactattggctacagttttatgattgtcattcgaacaatggcaaggaatgcaaa
tgaagaaggtggtggggatgatactagttttaatttcagctggaaaatgttcacaagctg
ggactacttgattggcaatcctgagacagcagataataagttcgcctccatcacaacaag
ctttaaggaagctatcgtggaggaacaggagagccgaaaagaggaaaatattcatttgac
tagattcctgagggttcttgctaacttcttagccctatgcacacttgctgggagtggcta
cctcatcttttttgttgtcagaagatcccagaaatttgccctggaaggtctggagaacta
cgggtggtgggaaagaaatgaagtgaacatggttatgtcacttttaggaatgttctgtcc
aactttatttgatgtaatcagttctctggaaaactaccatcctcgaatagctctaagatg
gcagctgggacggatctttgctctttttcttggcaatctctacactttcattattgccct
aatggatgaaatcaatctcaagttggaagaagaaaagatagtcaagtataacatgacaat
atgggaagccagtctgtacaatggtactattccagaaaattctactgctcctccaataca
ggtggaccctgcagatgtccctagagggccgtgctgggaaacaatggtaggacaggaatt
tgtgcggctgacagtctctgacacgatgacaacatacatcacaattctaattggtgattt
cttgagagctgtcttcgttaggtttttcaattactgctggtgctgggacttggagtatgg
atttccgtcatattctgagtttgatataagtggaaatgtgctgggactgatctttaacca
aggaatgatctggatgggatctttctatgctccatgcctcccagcgatcaacgtgttccg
cctccacacttcaatgtacctacaatgctgggcagtgatgtgctgcaacgtcccccagga
gagggtcttcaaggcttccagatccaataacttctacatggccatgctgcttttcatcct
ctttctctccacactgcctgctgtgtacaccattgtctccatcccaccatcttttgactg
tggtcctttcagcgggaagactagaatgtttgaagtcatatcagaaaccctggagcatga
cttcccttcctggtttgggaaggtatttggttatgcctctaaccctggactcatcctacc
ttttatattgctgatggtcctgagcatttattatctcaatgctacatccaaatcctacaa
ggaagctaacttggaacttaaaaagaagctacaaagtcaagcagaagaaaataaaagaag
aaataaacaaaaggcacaaaaatcaaatgagcacgaggaaaacccattcgagacagaacc
accacagccaaaacaaaaaagcggcaagcaagacaaatccattccaaaccaagacaacaa
gaaaggacagggtggcaatgaagcaaagaagacaggccagccacaagaagccagttcctc
tcaggcactccagcatctagaccctgccccaaatggccaccatgccccgcagagcagagg
aggaaacctttcgcccccatccatagctgtgacgaggccaccagggcccagggggtacgg
agtgctgggctatccacctggaaacctacgcttccctagggcacagccagaaacgcccag
ggctcctcccagctacagataa
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