Phalacrocorax carbo (great cormorant): 104050581
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Entry
104050581 CDS
T08596
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104050581 (SUPT6H)
03036 Chromosome and associated proteins [BR:
pcao03036
]
104050581 (SUPT6H)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104050581 (SUPT6H)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104050581 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
104050581
NCBI-ProteinID:
XP_009509766
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDEVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRGQKFRRV
RKMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEY
EYEDEETEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQL
RSIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIK
EALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKF
GLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIARE
PLVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLA
EEEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQ
FLYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGI
RVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKF
LLNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKS
ENEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALY
CEFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVT
MCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDES
AEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRT
PYRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCP
FCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKV
GMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRK
QQRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQ
HVDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGD
KKKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQ
VFPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNM
TSQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGPRSCSLQVFTTPAQQPVATPLMTP
SYSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPK
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtagaaagtgaagcggaggagtcggaggaggagtacaaccaggatggg
gaggttgtgcccagggtgaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggaggagaatctcgatgatcaagatgaacaggggaacctgaaagggttcattaatgac
gatgatgatgaggaagaggaagaagaggaagaagccagtgactctggagactctgaggac
gaagttggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgatttt
gacctcattgaagagaacttgggtgttaaagtcaaaagagggcaaaaattcaggcgtgtg
cgaaaaatgtccgatgatgaggatgatgaagaggaagactatggaaaagaagaacatgag
aaggaagccattgctgaagaaatctttcaggatggtgaaggcgaggagggaggggaagcc
gttgaagctcctgtcgctccaccagaagaggaagaggaggaggaggaagatgaatctgac
atcgatgacttcattgtggatgacgatggacaacctctgaagaagccaaaatggcgaaag
aagctccctggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggac
tttgactatgatgagtttgagaagtacaatgagtacgatgaggagatggaggaggaatat
gagtatgaagatgaagaaaccgaaggggagacccgcgtacgacccaaaaagactgccaag
aagcgtgtcagtcggcgtagcatctttgagatgtacgagcccagtgagctggagagcagt
cacctaacagaccaggacaatgagatccgcatgacagacatgcctgagaggttccagttg
cgatccatcccggtgaagagtgctgaagatgatgagctggaggaagaagctgattggatt
tacaggaacgcatttgcgacacccaccatctccttgcaggaaagttctgactacctcgac
cgtggacaagccagcagcagcttcagccgcaaggggcccagcaccatccagaagattaaa
gaagccctgaatttcatgagaaatcaacatttcgaggtcccattcatcgccttctacaga
aaggagtatgtggagccagagctgcacatcaacgacctgtggagggtctggcagtgggat
gagaagtggacccagctgaagatccgcaagcagaacctgacacgtctgtttgagaagatg
caggcctatcagtacgaacaaatctctgcggacccagacaagcccttggccgatggaata
agggccctggatactacagacatggagaggctgaaggacgtgcagtccatggacgagctg
aaggacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaat
gctgccaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaggaa
ggtgaaggggaggatgcagaagatgatgagcagaaggggcctgagctgaagcaagcctcc
cgtcgggacatgtacaccatctgccaaacagctgggctggatggcctggctaagaagttt
ggtctgacacccgagcagtttggagagaatctccgagacagttaccagcgccacgagaca
gagcagttccctgcagagcccctggagctggccaaggattatgtgtgtagtcaattccca
agccctgaagcagtgctggaaggagcccggtacatggtggctttgcagatagccagggag
cctttggtcaggcaggtcctgagacagactttccaagaaagagctaaaatcaacatttca
ccaacaaaaaaagggaagaaggatattgatgaagcccactacgcctattcctttaaatac
ttgaaaaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggca
gaggaggaggcactgctgactatagatatcagtattgacatgaaaggagtggagggctac
ggtagcgaccagacatactttgaggaaatcaaacagttctattatcgggatgagttcagt
caccaggtgcaggagtggaatcggcagcgtacgatggccatcgagcggtccctcaaccag
ttcctctatgtgcagatggcgaaagagttgaagaacaagctgttggtggaggccaaggag
tatgtcctcaaggcttgcagccggaagctgtacaactggctaaaagtagcttcataccgt
cccgatcagcaagtggaggaagacgatgatttcatggatgaaaaccaagggaaggggatt
cgcgtgctaggcattgcgttttcctcagccagggaccatcccgtgttttgcgcccttgtt
aatggagagggtgaggttacagacttcctccgattgccgcatttcacaaagagaaggaat
gcctggcgtgaggaagagagggaaaagaaggcccaggatattgaaaccttgaaaaaattc
ctcctgaacaagaagcctcacgtggtgacaattgcaggcgagaacagggatgctcagatg
ctgatggaggatgtaaagagaattgttcatgagctggatcaagggcagcagctgtcctct
atcggagtggagctggtggacaacgaactggccatcctctacatgaacagcaagaagtct
gagaatgagttccgggattacccacctctgctgcgtcaagccgtctcccttgctcgccgc
attcaggaccccctcatagagtttgcccaggtctgcagctccgatgaggatattctctgc
ctaaaactccaccctctgcaggagcatgtggtgaaggaggagctgctgaacgccctctac
tgcgaattcataaaccgcgtgaacgaggtgggagtggatgtcaaccgggcaattgctcac
cctcacagccaggctttgctccagtatgtgtgtggcctgggaccacgcaaaggcactcac
ctgctgaagatcttaaagcaaaacaacacgcgtctggagaacaggacccagctggttacg
atgtgtcacatgggacccaaggtgtttatcaactgtgctggcttcatcaaaattgacaca
gcgtcgctgggtgatagtactgattcctacatcgaagtcctagatgggtctagggtccat
cccgaaacctatgaatgggcaagaaaaatggcagtggatgccttagaatacgatgagtcg
gcggaggatgccaatcccgcaggagctctagaggagatcttggaaaaccccgagcgtctg
aaagacctggatctcgatgcttttgctgaagaactggaaagacagggctacggtgacaag
catatcactttatacgacattcgagctgaactaagctgcaggtacaaggacctgagaacc
ccataccgttctccaaacacagaagaggtcttcaacatgctgaccaaagaaactccagag
actttttatataggtaaaatgatcatctgcaacgtgactgggatagcccacaggcggcca
caaggagaaagctacgaccaggcaatacggaacgatgaaactggcctttggcagtgtcct
ttctgtcagcaggataacttcccagagctcagcgaggtttggaatcactttgacagcggt
tcctgcccaggtcaggccatcggagtgaagacgcgtctggataacggtgtcgccggcttc
atcccaacaaaatttcttagtgataaggtggtcaagcggccggaagagagggtgaaggtg
ggaatgaccgttcactgcaggattatgaagattgacattgagaagttcagtgcagacctg
acctgcaggacctcagacctgatggataagaacaacgagtggaaactgcctaaagacact
tactatgactttgactctgaagcagcagatcacaaacaggaagaagacctgaaaagaaaa
cagcagcggacaacgtacatcaagagagtaattgctcacccatcattccacaacattagc
ttcaagcaagcagagaagatgatggagactatggaccaaggggatgtgattattcggcca
agtagcaaaggggagaaccacctgaccgtcacctggaaggtgaatgatggcatttaccag
cacgtggatgtccgagaagagggcaaggagaacgccttcagcctgggctccacgctttgg
attaacacagaggagtttgaagacctggatgaaattgttgctcgctatgtccagccaatg
gcctcttttgccagagacctgttgaatcacaaatactatcaggactgcaacggtggagac
aagaagaagctggaagagctgctgataaagaccaagaaagagaagccaacatttattccc
tactttatcagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcga
ggcaaaccaaggatagagtatgtgacggtgacgccggaaggattccgctaccggggccag
gtcttccctaccgtgaacggactcttcagatggtttaaggatcattatcaggaccctgtt
ccaggtattacccccagcagtagcagtcggaccaggactccagcctccattaatgctact
ccagctaacattaacctggcagacctgacccgtgcagtgaacgctctcccgcagaacatg
acctcccagatgttcagtgccatcgctgccgtgacgggccagggacagaacccaaatgcc
accccggcgcagtgggcgtccagtcagtacggctacggaggcagcggtccgcgcagctgc
tctctgcaggtcttcacgactccagcacagcaaccggtggccacccctctgatgaccccc
agttactcctacactacccccagccagccgattacgacgccccagtaccagctccaggcc
aacaccacaccccagtccacccagtcccagacacagtcacagccgtcatccagctccaga
cagaggcagcagccaaagtga
DBGET
integrated database retrieval system
