Phalacrocorax carbo (great cormorant): 104050630
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Entry
104050630 CDS
T08596
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104050630 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104050630 (TRIP13)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
104050630 (TRIP13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
Viral_helicase1
AAA_14
AAA_18
RuvB_N
Cytidylate_kin
AAA_5
IstB_IS21
NPHP3_N
AAA_24
AAA_28
bpMoxR
ATPase_2
TsaE
NACHT
AAA_30
RNA_helicase
AAA_33
DUF815
ABC_tran
AAA_7
AAA_11
AAA_25
AAA_17
TIP49
PduV-EutP
AAA_RNF213_4
Rad17
Mg_chelatase
AAA_19
SLFN-g3_helicase
NB-ARC
PhoH
nSTAND6
AAA_3
Motif
Other DBs
NCBI-GeneID:
104050630
NCBI-ProteinID:
XP_009509813
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MDKAAGDLKQALPNVCDGVQIHVEVHQKSSSVAKKEDIRMSVLTLLNRHNIVFGDYKWTE
FDDGFLNSNVQSVSIVDTDLKLKDRQPIDLSKSSLSLHIFHLNEEGPSSENLEEENEDII
AANHWVLPAAEFHGLWESLIYDTEVKSHLLDYVTTTLLFSDKNVDSNLVSWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELI
DDKDALVFVLIDEVESLTAARSAFRAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FVENNVSRLSLVLKEISRRSEGLSGRVLRKLPFLAHALYIQVSLLYLSKFILLISLAVDK
QFEERQKLAERKKLADCV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagccgctggggatttgaagcaagcgctcccaaacgtgtgcgacggcgttcaa
atacacgtggaggttcatcagaaatcgagcagtgtggccaagaaagaagatatcaggatg
agtgtcttaactctgttgaacagacataacattgtgtttggtgattacaagtggacagag
tttgacgatggtttccttaacagcaatgtgcaatctgtgtcgattgtggatacggatctg
aaactgaaagacagacagcctattgacttgagcaaaagcagtctttctcttcatattttt
catctgaatgaagaaggaccaagctctgaaaacctggaagaagagaatgaggatatcatt
gcagctaaccactgggtgctaccagcagctgaattccatggcctttgggaaagtctcata
tatgacactgaagtaaaatcacacttgcttgattatgtgacgacaacattactcttttct
gacaaaaacgttgacagcaacctggtatcgtggaacagagttgttctgctgcatggccct
cctggaactgggaaaacctctctctgtaaagcattggctcagaagctgacaattcgactg
tcgtacaggtataggtatggacagttaattgagataaacagccatagccttttctctaaa
tggttttctgagagtggcaagcttgtaaccaagatgttccagaagattcaagagttaatt
gatgacaaagatgctcttgtatttgtactgattgatgaggtggaaagcctcacagcagcc
cgcagtgccttcagggcaggcacagagccttcagatgctattcgtgtggtgaatgctgtg
ctgacacaaatagatcagattaaaaggtatcccaatgtagttatcctgactacttcaaat
attacagagaaaattgacatggcctttgtagacagggctgacataaagcaatacattgga
cctccatccactgcggcaatatttagaatatatctttcttgcttggaagaactgatgaag
tgccaaataatatatcctcgacagcagctcctgaccctcagagagctagagatgataggc
tttgtagaaaataatgtgtcacggttaagccttgtattaaaagaaatctcaagaagaagc
gaaggtcttagtggccgggtcctgagaaaacttcctttcttagcacatgcgctttatatt
caagtaagtttattatatttaagtaagtttattctactaatttcccttgcagtagacaaa
caatttgaagaaagacagaaacttgcagaaagaaagaaacttgcagactgtgtgtga
DBGET
integrated database retrieval system
