Phalacrocorax carbo (great cormorant): 104050708
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Entry
104050708 CDS
T08596
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104050708 (PRDM1)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104050708 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
C2CH-3rd_BIRD-IDD
zf-C2H2_15
CapR
STL11_N
Motif
Other DBs
NCBI-GeneID:
104050708
NCBI-ProteinID:
XP_009509914
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
IYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELL
VWYCRDFAERLHYPFSRELTMMNLTQTHVNPKQHSADKDELCQKSIPKKEHSVKEILKME
SNPPKGKDFFQTTISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRPHIPEDYLKASLAYG
LDRPSYITHSPIQTSTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHREPYSYL
NGSYGSEGLGSYPGYAPPGHLPPAFLPSYNPHYPKFLLPPFNMSCNNLSALNNINGINNF
NLFPRMYPLYGNLLSGGLILDTRPPATLPPATLPSSLPSEGGRRLLQPDHPRDFLIPAPN
SAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGSEEAMNLIKSK
RNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFT
QLAHLQKHYLVHTGEKPHECQVXXXXXXSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVH
LKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSTEDLNRINEEIEKF
DISDNADKLEEVEDNIDLTSIVEKDILTMLRREMEGANLKVSLQRNLGNGLISSGCNLYE
SSDMSIMKLPHGHPLPLLPVKVKQETVEPMDP
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atctattcaagtggcgagcttcaccacttcattgatggatttaatgaggacaagagcaac
tggatgcgttatgtaaatcctggctactctgttcaggaacagaacttggctgcttgccag
aatggaatgaacatctacttctacaccatcaagcccatccctgccaaccaagagctgctt
gtgtggtattgccgagactttgcggagaggctgcactatcccttctccagagagctgaca
atgatgaacctcacacaaacccacgttaatccaaagcagcacagtgctgataaagatgag
ctctgtcagaaaagcatcccaaagaaggagcacagcgtgaaagaaatcctgaaaatggag
tccaatcctccgaaaggaaaagatttcttccagaccaccatttcaccagtaactccagaa
aaagacttggatgatttgcgtaagaactatagcccggagaggtgtttcttccctcgagtt
gtctacccgatccgacctcacattccagaagactatctgaaagcttccttagcgtatggg
ctggacagacccagctacattactcactcgcccatacagacgtctactacgccgagtcct
tctgggaggagcagcccagaccaaagtttaaaaagttcaagccctcacagcagtccaggg
gtcacggtttcgcctctggcacctacttcccaagagcacagagagccgtactcttacttg
aacggatcgtacggctcagaaggattggggtcttatcctggatacgcgccccccggccac
cttccacctgcctttctaccatcctataacccccactaccccaaattcctgttacctcca
ttcaatatgagctgtaataacctgagcgctttgaacaatatcaatggcatcaacaatttc
aatctcttcccaaggatgtatcctctgtatggcaacctgctcagtggaggtcttatcctg
gatacgcgccccccggccaccttgccccctgccactctccccagttcattgcccagtgaa
ggaggccgtcgattgctgcagcctgatcatccgagagacttcctcataccagcacctaac
agtgccttctctatcacgggcgctgccgccagcatgaaggacaagccgtgcagccccacc
agcgggtcacccacagctggtacagcagccagttcagaacacataatgcaacctaaacct
acctcagtggtgttggctgccaccggcagtgaagaagccatgaatctcattaaaagcaag
aggaatgtgaccggttacaaaaccctcccatacccactgaagaagcagaatgggaagatc
aagtacgaatgcaatgtttgctccaagacatttggccagctctccaatctgaaggtgcac
ctccgagtacacagcggagagagaccgtttaaatgccagacttgcaataaaggcttcacg
cagctggctcacctccagaagcactatctggtacacacgggagaaaaaccccacgagtgt
caggtnnnnnnnnnnnnnnnnngcagcaccagcaatctcaaaacgcacctgcggctccac
tccggagagaagccttaccagtgcaagctctgcccggccaaattcacccagttcgtgcac
ctgaagctgcacaagcgtctccacacccgggagcgtccccacaaatgcatccactgccac
aagagctacattcacctctgcagcctccaggtccacctgaagggcaactgccccgtcgcc
cccgcctctggcctctccacggaggacctgaatcgcatcaacgaggagattgagaagttt
gacatcagtgacaatgccgacaagttggaagaagtggaggacaatattgacctaacatcg
atcgtggagaaggatatactgaccatgctcaggagggagatggaaggagctaatctgaaa
gtatctctgcagaggaacctgggaaacggacttatctcctcaggatgcaacctttacgag
tcgtcagatatgtcaattatgaagttgcctcacggtcacccactacctctgttacctgta
aaggtcaagcaagaaacagttgaaccaatggacccttaa
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integrated database retrieval system
