Phalacrocorax carbo (great cormorant): 104050950
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Entry
104050950 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104050950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104050950
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104050950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
104050950
NCBI-ProteinID:
XP_009510202
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MQQALELALDRAEYIIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEIKKLRRN
VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSGNMKSPTYQSKHILLRPTMQTLICDVHSI
TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTTNRLLYNKQKMNTRPMKRCFKR
YSRSSLNRQQEVAHYSTPPQLRLLDYLQKRKERKGAQQYDLKISKAGNCVDMWKQNPCYL
TAPSEVDVEKYAKVEKSIKPDDSQPTVWPAHEIKDDYVFECEVGNQLQKTKLTIFQTLGN
PLYYGKIQTLKGDEENDNLLSPSQFLIGSKTDAERVVNQYQELVQNEAKCPVKMFHNSGG
SVNLSHLSPGKEMEPESISGSVQSSVLGKGVKHRPPPIKLPSSSGSSSSGNIFSPQQSSG
HLKSPTPPPLPSKPPGLSRKQSMDLNAVSMLSPAAMSPASSSQRTTSTQVMANPAGLNFI
NVVGSVCGAQTLMSGSNPMLGCNTGAIAPAGINLGGILPSGGLVPSALPAAMQSASQAGS
PFGLKNASNLRPLNLLQGSDQGPANQDQSLSAQQAAVINLTGVGNFMQPQATAVAILAAS
NGYGSSSSTSSSPXXXXXKQLQPLKK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagctttagaactggcattggatcgtgcagagtatatcattgaaagtgcccgt
cagagacctcccaaacgaaaatatttatccagtggaagaaaatctgtatttcaaaaactc
tatgatttatatatagaagaatgtgaaaaagagcctgagataaagaagctgaggcgaaat
gtgaatttacttgagaagctggttatgcaggagacgttgtcatgtctggtagtgaacctc
tatccaggaaatgagggttattcacttatgctcaggggaaaaaatggttcagattctgag
accattcggctgccttatgaggaaggagagctgcttgaatatttggatgcagaggagctg
ccacctattttggttgatcttttagaaaaatctcaggttaatatatttcattgtggatgt
gtcatagcagaaatacgtgactataggcagtctggtaacatgaaatctccaacgtaccaa
agcaagcacattcttttgcgtcctacaatgcaaactttaatttgtgatgtgcattctata
acaagtgacaaccacaaatggacacaggaggacaaactcctacttgagagccaacttatt
ttggctacagcagagcctttgtgtcttgatccttcaatagcagtgacctgtactacaaac
agactcctgtacaacaagcagaagatgaatactcgcccaatgaaacggtgcttcaaaagg
tactcacggtcatctctgaacagacagcaggaagtagctcactattcaactccacctcag
ctcagactacttgactacttacagaaaagaaaggagaggaaaggagcccagcagtatgac
ctcaaaatttctaaagctggaaattgcgtagatatgtggaaacagaacccttgctatttg
actgcaccttctgaagtggatgtggaaaaatatgccaaagtggaaaagtctatcaagcct
gatgactcacaaccaactgtctggccagcccatgaaataaaagatgattatgtgtttgaa
tgtgaagttggtaatcagcttcaaaaaacaaaactgaccatttttcagactcttggcaat
cccttgtactatggtaaaatacagacactcaaaggtgatgaggaaaatgacaacctatta
agtccatcacagttccttattggctcaaagactgatgctgaaagagtggtgaaccagtat
caggaattggtgcaaaatgaagcaaaatgtcctgtgaaaatgtttcataattcaggtgga
tcagtcaatcttagtcatctttctccagggaaggaaatggaaccagaaagtatatcaggc
tctgttcagtcttcagtattggggaaaggtgtaaaacaccgacctcctcccatcaaatta
ccttcaagttcaggaagtagctcttcaggtaatatttttagtccgcaacagtcaagtggc
catctaaaatccccaactcctcctcctcttccttctaagcctcctggtctttctcggaaa
caatctatggatcttaatgcagttagcatgctctctccagctgccatgtctcctgcgagc
tcttcacaaagaacaacctccacccaggtcatggcaaaccctgcaggacttaacttcatc
aatgtagtgggctctgtgtgtggagcacagacactgatgagtggttcaaaccctatgttg
gggtgcaacactggtgccatagcccctgcaggtataaatctgggtggcattttaccatca
ggaggtctggtaccaagtgcgctgcccgctgcaatgcagtctgcctctcaagcaggcagc
ccctttggtttgaaaaatgcatcaaatcttcggcccttaaatcttctacaggggtctgac
caaggtccagccaatcaagaccagtcattatctgcccaacaagctgctgtaattaacctg
actggagtagggaattttatgcaacctcaagccacagcagttgcgattcttgcagcatca
aatggctatggcagcagcagcagcacaagcagctcacctnnnnnnnnnnnnnnaaaacag
cttcagccactcaaaaagtag
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