Phalacrocorax carbo (great cormorant): 104051051
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Entry
104051051 CDS
T08596
Symbol
PCDH17
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-17
KO
K16499
protocadherin delta 2
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcao04515
]
104051051 (PCDH17)
Cell adhesion molecules [BR:
pcao04515
]
Cadherins
Protocadherins
104051051 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_C_2
Cadherin_4
DUF7499
Motif
Other DBs
NCBI-GeneID:
104051051
NCBI-ProteinID:
XP_009510316
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
ELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPXFSIAPQSGLIRVKGNLDYEESG
LIEIDVQARDLGPNPIXXXXXXXXXXLIARNENAPPIGFVSVRQGALSEAAPPGTVIALV
RVTDRDSGKNGQLQCRVLGGGGGPGAIPFTLEENYDNFYTVVTDRPLDREAQDEYNVTIV
ARDEGNPPLNSTKSFSVRILDENDNPPRFSKNLYVLQVPENNIPGEYLGSVLAQDPDLGQ
NGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSFNYEQTKHFEFRVLAKDSGSPHRE
SNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNAGVGYPVGTVRALDSDFGESGRLT
YEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAELVVKVSDHGKPSLSAVAKLIVRAL
AGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTVSIILLAAMITIAVKCKRENKEIRTY
NCRIAEYSHPQLGGGGGSGGGGGGSGSGGGKGKKKKISKNDIMLVPSEGEDSRGPLNVMN
VVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHVGCHTSFTGQGTNAS
EAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDT
NKGSCCDMSVREALKMKTTSTKSQPLEQEQEECVNCTDECRVLGHSDRCWMPQFPAASQA
ENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRA
LSPLLQEVPSASSSPTKTCIEPCTSTKGPLDGCEVKSGALAEPSSQYLSTDSQYLSPSKQ
SKDAPFIASDQMARAFADVHSRVSRDSSEMDSVLEQLDRSARDLGRESVDAEEVVREIDK
LLQDCRGSDPVAVRK
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
gagctgccagagaatgcgccgctgggcactgctgtcattgaccttaatgccaccgatgcc
gacgagggtaccaatggagaggtgctctactccttcagtggctacgcacctntgtttagc
attgccccgcagagtggcctcatccgtgtcaagggcaacctggactatgaggagagcggc
ctcattgagatcgatgtccaggctcgggacctggggcccaatcccattnnnnnnnnnnnn
nnnnnnnnnnnnnnnnncctcattgcccgcaatgaaaatgcgcctcccattggctttgtc
tccgttcgccagggagcactgagcgaggctgccccaccgggcacagtcattgccctggtg
cgggtcactgaccgtgactcgggcaagaatgggcagctccagtgccgggtgctgggtggt
ggcggcgggcccggagccatccctttcaccctggaggagaactatgacaacttctacact
gtggtcaccgaccgccccctggaccgcgaggcacaggatgagtataatgtgaccatcgtg
gcacgtgatgagggcaaccccccactcaactccaccaagtcattttctgtccggatcctc
gatgagaatgacaatccaccccgcttcagcaagaacctctatgtgttacaggtgcctgag
aacaacatccctggtgaatacctgggctctgtcttggcccaggaccctgacctgggccaa
aatgggacagtctcttactccattttgcccgggcatgtgggcgatgtctccatctacacc
tatgtctctgtcaaccccaccaacggtgccatctatgccctgaggagcttcaactacgag
caaacaaagcacttcgagtttcgtgtgctggccaaagactcaggttcaccccaccgtgaa
agcaatgccacggtgcgagtcaccgtgctcgatgtcaacgacaacgcacccctcatcgtc
ctccctgccctcatcaatgacaccgcagagctgcaggtgccacgtaatgctggggtgggc
tatcctgtgggcaccgtccgcgccctggacagtgactttggggagagcgggcgcctcaca
tatgagattgtggaaggcaatgaggaacacctctttgagatggaccccactagcggtgag
atacgcaccttgcatccttactgggaggagctcagccctgtggctgaactggtggtaaaa
gtcagtgaccatggcaagcccagcctctctgcagtggccaagctcattgtcagggccttg
gcggggcccctgcccgaggctggggagccacaggtgaatggcgagcagcatcggcgacca
cactgggacttgtcgctgcccctgatcgtgacgctgagcactgtctccatcatcttgctg
gctgccatgatcactattgccgtgaagtgcaagcgagagaacaaggagatccgcacctat
aattgtcgcattgccgagtatagccaccctcagctgggaggagggggaggcagtggcggg
ggaggaggaggcagtggcagtggagggggcaagggcaagaagaagaagatcagcaagaat
gacattatgctggtgcccagtgagggcgaggacagccggggccccctcaatgtcatgaac
gtggtgagcagcccatccctggccacctcacccatgtactttgactaccagacccgcctg
cccctcagctctcccaggtctgaggtgatgtacctgaagcccgcctccaacaacctgact
gtaccccagggacatgtgggctgccacaccagcttcacagggcaagggactaacgccagc
gaggctcccccgagccggatgtccataattcagacagacaattttcccgcagagcccaat
tacatgggcagcaggcagcagtttgttcaaagtagctccacgttcaaggatccagaaaga
gccagcttgagggacagcgggcatggggacagtgatcaggctgacagtgaccaagacact
aacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatgaaaactacttca
actaaaagccagccacttgaacaagagcaagaagaatgtgttaactgcacagatgaatgc
agagtgcttggtcattctgacaggtgttggatgccacagttccctgcagccagtcaggct
gagaatgcagattatcgcacaaatctctttgtacccacagttgaagctaatgttgagact
gagacatatgaaactgtgaatcccactgggaaaaagactttttgtacatttgggaaagac
aagagagagcacactattctcattgccaatgttaaaccttacttaaaagccaaacgtgcc
ctgagtcctctgcttcaggaggttccctcagcatcgagcagcccaaccaagacatgcatt
gagccttgcacctcaacaaaaggaccactggatggttgtgaagtgaaatcaggagccttg
gctgaaccaagcagccagtacttgtcaactgacagtcagtatctatcgcctagtaaacag
tcaaaagacgctcccttcattgcatcagatcagatggctagggcctttgcagatgtacat
tcccgagtaagccgagactcgagtgagatggactctgttctggagcagttagaccgttca
gcccgggatctaggcagggagtcggtggatgccgaggaagttgtgagagaaatagacaag
ctcttgcaggactgtcggggaagcgaccctgtggctgtcagaaagtga
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