KEGG   Phalacrocorax carbo (great cormorant): 104051114
Entry
104051114         CDS       T08596                                 
Symbol
CDH4
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-4
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
pcao  Phalacrocorax carbo (great cormorant)
Pathway
pcao04514  Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:pcao00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    104051114 (CDH4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pcao04515]
    104051114 (CDH4)
Cell adhesion molecules [BR:pcao04515]
 Cadherins
  Major cadherins
   104051114 (CDH4)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_FAT4_N Cadherin_4 Stevor DUF5527
Other DBs
NCBI-GeneID: 104051114
NCBI-ProteinID: XP_009510400
LinkDB
Position
Unknown
AA seq 620 aa
TYVMTVTANDADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQ
QYIVIVQATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANL
TVMDRDQPHSPNWNAIYRIISGDPSGHFTIRTDPVTNEGMVTVVKAVDYEMNRAFMLTVM
VSNQAPLASGIQMSFQSTAGVTISVTDVNEAPYFPTNHKLIRLEEGVPTGTVLTTFSAVD
PDRFMQQAVRYSKLSDPANWLNINATNGQITTAAVLDRESDYIKNNVYEATFLAADNGIP
PASGTGTLQIYLIDINDNAPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPS
VPSAVRKNWTITRLNGDYAQLSLRIMYLEAGVYDVPIIVTDSGNPPLYNTCVIKVKVCPC
DENGDCTTIGAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPE
DDVRDNILKYDEEGGGEEDQDYDLSQLQQPETMDHVLNKTPGVRRVDERPIGAEXXXXXX
XXXXDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYL
NDWGPRFKKLADMYGGGEED
NT seq 1865 nt   +upstreamnt  +downstreamnt
gtacctacgtgatgacagtgacggcaaatgatgcagatgatagtactacagcgaacggga
tggtgagataccgaatcgtgactcagaccccgcagagcccatcgcaaaatatgtttacta
ttaacagcgagacgggagacattgtcactgtggctgctggacttgacagagagaaagttc
agcagtatatagtcattgttcaagccacagatatggaaggaaatcttaactatggtctct
caaacacggcaacagcgatcattacggtgacagatgtgaatgacaacccacccgaattca
ctaccagcacttattcaggagaagttcctgagaacagagtggaggttgtggtggcaaatc
tgacagtgatggaccgggaccagcctcactcccccaactggaacgccatctaccgcatta
tcagtggagacccctctggccatttcaccatccggacagaccctgtcaccaacgaaggca
tggtaaccgttgtgaaggcagtcgattacgagatgaacagagctttcatgctgacagtga
tggtctcaaaccaagctcccctggccagtggcatccagatgtccttccagtcaaccgcag
gagtcaccatttcggtcacagatgtcaacgaagcaccgtatttcccaacaaaccacaagt
taatcaggctggaggaaggggtgcctacaggaacagtcctgacaacattttcagcagtgg
atcctgatcgcttcatgcagcaggcagtaagatactctaagctgtcagatcctgcaaact
ggctgaacattaatgccacaaatggtcagatcactactgctgctgtccttgatcgagagt
cagactacattaagaataatgtctacgaggccacattcttggcggctgacaacggtatac
cccccgcaagcggcactggcactctgcagatctacctaatcgacatcaacgataatgctc
ctgagctcctgccaaaggaggcacagatctgtgaaaagccaaacctgaatgtcatcaaca
taacagcagcggatgctgacatcgatccaaacgttgggccctttgtcttcgagctgccaa
gtgtgccatctgcggtgaggaagaactggaccataacacggctgaatggtgattatgccc
agcttagtttacgaatcatgtacctggaagcgggtgtgtatgacgtgccgataatcgtga
cggactcaggaaacccccccttgtacaacacctgcgtcatcaaagtgaaggtgtgcccgt
gcgacgagaacggcgactgcaccaccatcggggcggtggctgcagcggggctgggcacgg
gggccatcatcgccatcttgatctgcatcattattttactgaccatggttctgctgttcg
tggtgtggatgaaacgccgggagaaggagcgccataccaagcagctcctgatcgaccccg
aggacgacgtcagggacaacattctgaagtacgatgaagagggaggtggagaggaagacc
aggattacgatttaagccagctgcagcagccagagaccatggatcatgtgctgaacaaga
cacctggagtcagaagggtggatgaaagacctattggtgctgaanncnnnnnnnnnnnnn
nnnnnnnnnnnnnngatattggtgactttattaatgagggcctgcgcgcggcggacaacg
accccacggcccccccctacgattccctgctggtcttcgactacgagggcagcggctcca
ccgccggctccgtcagctccctcaactcctccagctccggggaccaggactacgactacc
ttaacgactgggggcccaggttcaagaaactggcggacatgtatgggggaggcgaggaag
attaa

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