Phalacrocorax carbo (great cormorant): 104051114
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Entry
104051114 CDS
T08596
Symbol
CDH4
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104051114 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcao04515
]
104051114 (CDH4)
Cell adhesion molecules [BR:
pcao04515
]
Cadherins
Major cadherins
104051114 (CDH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
104051114
NCBI-ProteinID:
XP_009510400
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
TYVMTVTANDADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQ
QYIVIVQATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANL
TVMDRDQPHSPNWNAIYRIISGDPSGHFTIRTDPVTNEGMVTVVKAVDYEMNRAFMLTVM
VSNQAPLASGIQMSFQSTAGVTISVTDVNEAPYFPTNHKLIRLEEGVPTGTVLTTFSAVD
PDRFMQQAVRYSKLSDPANWLNINATNGQITTAAVLDRESDYIKNNVYEATFLAADNGIP
PASGTGTLQIYLIDINDNAPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPS
VPSAVRKNWTITRLNGDYAQLSLRIMYLEAGVYDVPIIVTDSGNPPLYNTCVIKVKVCPC
DENGDCTTIGAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPE
DDVRDNILKYDEEGGGEEDQDYDLSQLQQPETMDHVLNKTPGVRRVDERPIGAEXXXXXX
XXXXDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYL
NDWGPRFKKLADMYGGGEED
NT seq
1865 nt
NT seq
+upstream
nt +downstream
nt
gtacctacgtgatgacagtgacggcaaatgatgcagatgatagtactacagcgaacggga
tggtgagataccgaatcgtgactcagaccccgcagagcccatcgcaaaatatgtttacta
ttaacagcgagacgggagacattgtcactgtggctgctggacttgacagagagaaagttc
agcagtatatagtcattgttcaagccacagatatggaaggaaatcttaactatggtctct
caaacacggcaacagcgatcattacggtgacagatgtgaatgacaacccacccgaattca
ctaccagcacttattcaggagaagttcctgagaacagagtggaggttgtggtggcaaatc
tgacagtgatggaccgggaccagcctcactcccccaactggaacgccatctaccgcatta
tcagtggagacccctctggccatttcaccatccggacagaccctgtcaccaacgaaggca
tggtaaccgttgtgaaggcagtcgattacgagatgaacagagctttcatgctgacagtga
tggtctcaaaccaagctcccctggccagtggcatccagatgtccttccagtcaaccgcag
gagtcaccatttcggtcacagatgtcaacgaagcaccgtatttcccaacaaaccacaagt
taatcaggctggaggaaggggtgcctacaggaacagtcctgacaacattttcagcagtgg
atcctgatcgcttcatgcagcaggcagtaagatactctaagctgtcagatcctgcaaact
ggctgaacattaatgccacaaatggtcagatcactactgctgctgtccttgatcgagagt
cagactacattaagaataatgtctacgaggccacattcttggcggctgacaacggtatac
cccccgcaagcggcactggcactctgcagatctacctaatcgacatcaacgataatgctc
ctgagctcctgccaaaggaggcacagatctgtgaaaagccaaacctgaatgtcatcaaca
taacagcagcggatgctgacatcgatccaaacgttgggccctttgtcttcgagctgccaa
gtgtgccatctgcggtgaggaagaactggaccataacacggctgaatggtgattatgccc
agcttagtttacgaatcatgtacctggaagcgggtgtgtatgacgtgccgataatcgtga
cggactcaggaaacccccccttgtacaacacctgcgtcatcaaagtgaaggtgtgcccgt
gcgacgagaacggcgactgcaccaccatcggggcggtggctgcagcggggctgggcacgg
gggccatcatcgccatcttgatctgcatcattattttactgaccatggttctgctgttcg
tggtgtggatgaaacgccgggagaaggagcgccataccaagcagctcctgatcgaccccg
aggacgacgtcagggacaacattctgaagtacgatgaagagggaggtggagaggaagacc
aggattacgatttaagccagctgcagcagccagagaccatggatcatgtgctgaacaaga
cacctggagtcagaagggtggatgaaagacctattggtgctgaanncnnnnnnnnnnnnn
nnnnnnnnnnnnnngatattggtgactttattaatgagggcctgcgcgcggcggacaacg
accccacggcccccccctacgattccctgctggtcttcgactacgagggcagcggctcca
ccgccggctccgtcagctccctcaactcctccagctccggggaccaggactacgactacc
ttaacgactgggggcccaggttcaagaaactggcggacatgtatgggggaggcgaggaag
attaa
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