Phalacrocorax carbo (great cormorant): 104051154
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Entry
104051154 CDS
T08596
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcao03009
]
104051154 (SPATA5L1)
Enzymes [BR:
pcao01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
104051154 (SPATA5L1)
Ribosome biogenesis [BR:
pcao03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104051154 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_16
AAA_5
AAA_lid_PRS2_C
AAA_2
DUF6497
AAA_14
AAA_22
RuvB_N
Rad17
DUF815
TIP49
AAA_7
Motif
Other DBs
NCBI-GeneID:
104051154
NCBI-ProteinID:
XP_009510455
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
VSASDLKGLMLGVGQLQLLAYRRLKKATVKVVLESSALKKSTPSAVLQEMIRELLRNVYV
SLHYVVTVPPNLKSPVVHIEILSVDPLTDEAGLITPQTSIKIKEVVTFEWYRHLSEDTVK
MSIAGLDDARKSLKEVVDLPFRFPKTFKKLGLSVPNGVLLIGXXXXXXXXXXXKEVGAYL
FCISGPALYGSRPGESEENLRRVFEKGREMSHEGPTILFIDEVDSLCPKRGSSNSAPEYR
VVAQLLTLLDGVGSEGKMVVMAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQL
LTSSMPISTDIDLVKLAEMTTGYVGADLTALCREAAMQAVFHSSLDSTETVINIADFQEA
FKKIQPSSFRSAIGLTECKPVTWEEIGGLEDVKLKLKQSIEWPMKYPQAFARMGLSHPKG
ILLYGPSGCAKTTLVKAVATSCHCSFLSVSGADLFSPYVGDSEKILSQVFHQARASTPAI
IFLDEIDSILGSRSHCKTGHGVSERVLSVLLNELDGIGLKVTERRGSKLQLEGQCQEQSD
KERKLEFQETLDKDFIVVAATNRPDMLDDALLRPGRLDKVIYIPPPDLKGRLSILKICTE
RIPLDTDVSLQDVAVLTDLFSGADVENLCKEAALLALQENGLEATTVKHEHFVKSLRTVK
PSLNIKDLEFYEKFYKQELASRIKKE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtaagcgccagcgacctgaagggcctcatgctgggtgtcggccagctgcagcttttggcg
taccgtcggttgaaaaaggcgactgtgaaagtggtccttgagagctctgcactgaaaaag
tcgactcccagcgcagtgttgcaggagatgatcagagaactgctgagaaatgtttatgtt
tcacttcattacgttgttactgttcccccaaatctcaaaagtcccgtggtgcatattgaa
atactgtctgtagaccctttgacggatgaagctggactgataaccccccaaacaagcata
aaaattaaggaggtggtcacttttgaatggtacagacatttatcagaagacacagtaaaa
atgtcaattgcaggactagatgatgcaagaaagtctttgaaagaagtggttgacctgcct
ttccgcttcccaaaaacttttaagaagctagggctgtctgtccccaatggggtgctatta
ataggccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaagaggtgggtgcatatctg
ttttgcatcagtggcccagccctctatggctccagaccaggagaaagtgaagagaatttg
cgaagagtctttgaaaagggaagagaaatgtcacatgaaggcccaaccattctctttatt
gatgaagttgactctctatgcccaaagcgaggaagttcaaacagtgctcctgaatatcgt
gttgttgctcagttgctcacgctactggatggtgtaggcagtgagggcaagatggtcgtt
atggcagcaacgaacaggcctgatgccttagaccctgcactgagaagacctggcaggttt
gacagagaggtgattattgggacaccaacacttacgcaaagaagatctatcctgcagttg
cttacatctagtatgcctatttctacagacattgatttggttaaactggcagaaatgaca
actgggtatgttggagctgaccttacagcactctgcagagaagctgctatgcaggctgtg
ttccacagctctttggattcaactgaaacagtgattaacattgcagatttccaagaagct
tttaaaaaaattcaaccatcctcttttcgaagtgcaattggactaacagagtgtaaacct
gtcacctgggaggaaattggtgggcttgaagatgtgaaattaaagttaaagcagagtatt
gagtggcctatgaaatatcctcaggcgtttgctaggatgggcctgtcacatccaaagggt
attcttctctatgggccatcagggtgtgccaaaaccacactggtgaaggctgtggccaca
agttgtcactgttcctttctctctgtaagtggtgctgaccttttctcaccttatgttgga
gattcagagaagattctgtctcaggtttttcaccaagcaagagcaagtactccagcaata
atattcctagatgagattgattctatcttgggatctcggtcacactgcaaaactggccat
ggtgtctcagagcgtgttctttctgttcttctcaatgagttggatggtattgggctgaaa
gtcacagaaagaagaggaagcaaactacagcttgaaggtcaatgtcaagaacaaagtgac
aaggaaagaaagctggagtttcaggaaactttggacaaagatttcatagtagttgctgcg
acaaatagaccagatatgttggatgatgccttattgcgtcctggaaggctagacaaggtg
atctatattccacctccagatctgaagggaaggctttccattttgaaaatctgcacagaa
agaattccgttggatactgatgtgtcattacaagatgtggcagtcctaacagacctcttc
tctggagctgatgttgaaaatctgtgcaaggaggctgctttgttggcattgcaagagaat
gggcttgaagcaactacagtaaaacatgagcattttgtaaaatcattgaggactgtaaaa
ccatccttaaacataaaagacttggaattttatgaaaaattttataaacaagaattagca
tctagaatcaaaaaggagtga
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