Phalacrocorax carbo (great cormorant): 104051213
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Entry
104051213 CDS
T08596
Symbol
UTP20
Name
(RefSeq) LOW QUALITY PROTEIN: small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcao03009
]
104051213 (UTP20)
Ribosome biogenesis [BR:
pcao03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104051213 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
104051213
NCBI-ProteinID:
XP_009510520
LinkDB
All DBs
Position
Unknown
AA seq
2791 aa
AA seq
DB search
FLTFSERLSNVNIDIIHRIDRTGSYAEEVETYFSEGLRKWRELNLTQHFVQFYNEVATKC
QSFNQLVYYQSAIVQSLKTHLQVEGSLAYQPLLDLVVQLARDLQTDFYPHFHDFFLAITK
LLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAHHKLHIRSFAAESFVF
LMRKVSDKNSIFNLMLSDLGEHPEKVEGVGQLLFEMCKGVRNMFHSCAETAMKLILVKLG
PVTEEEIELPWVTVGEAFEQMMRSAAVHIHKEHFDIVFKCLEESLLDLQRRITKANCCMA
SEQMERILQAYLILVKHANGSKISLPERVCQILIKMLQTPDLSSSCXXXXXISASLLAEN
VFLPDSLTKEAIEKVFASGFERCFLLDFSEAMFTMKQFERHFLPCFLEYIEHCFSGTDAL
AKDEAMAILAKLILVKAEPPTVGSMAFEKYPLVFTESSVSSNTRQQTSKRQGGKAKVPVL
DHVLSLIHLPEKEDIIDLSQPWVALVVLPHIRPMDKENIVPCVTSFIDSLFTAIDKGNIY
KGSLFVACQAVSTLLSLAESSEILHLLPVERVRSLVTTFPSDPSALLLADLYYTRLALCG
CQEPLSQVNLMDLFEKLHPNISTGVSKVRLLTVRILNHFENPPSTQIEGDGTGELQPVFA
ILLQAELVPATVNDYREKLLHLRKLRYDVVQSAIPSGSLQEVPLRYLLGMLYINFSPLWD
PVIELITSHAKDMENKQFWKVLYEHLERAATYAELELQNELDEQEEGIAEIESEKIEKMS
GGGVGSVFLEQLRTRTDCSDRLDHTNFRFLLWKALDKFPDRVEPRSRELSPLLLRFIRNE
YYPADSLVAPSQDLRKKTSGTVAAKEIPSEEVNDVEMEEEEEEKEEGEPITIGLPKKKTR
RAAAKQLIAHLQVFSKFSNPRALYLEQKLNALYTQLLSHQDQNVQRIALDCIMTYKHPHL
LPYRENLQRLLEDKSFKEEIVHFSISEETTVVKMEHRPDLIPVLMRILYGRMRNKTGSKT
QGKSSAGTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNGPCQTAVLRSMSELDLAKV
LPLGRQHSLFNGLEVVLKNMGHLIHQYLPEILQILLCMTAVVNCILQQREKVQPRLINPL
KNLRRLGLKLVVEFFSDYETYSFSVEEIDAVFHAVVWPQVCRLASESQYSPTFLLKLIHT
WSKNPRYFPLLAKQQPDHPECDILSNVFAVLSAKNLSEATSSLVMDIADSLLNSPDFEPT
EQVSSLNVTDSVVVVTGDVTEETLSLGCRLVLPHVPAILQYFSKTMLNVEKVKKKKYRAQ
VSKELSILSKISKFIQERSQNSVLVSLLLPFLYQSNMEQGTEIDILETVQNLLRHCSNPT
NFLKPLAKLFSVIQNKLSRHKLCLVFQTLSDLDSELTYITDVVKLNAFDQRHLDDIDFDV
RLSAFQSITAHIKEMQTVDIDFLIPVLHNCFYTIQLGDMALSDNASLCLTSFIRRLAEID
HTEDDYKELIQHTLLESVRRGLKSKTESIQQDYTSLLSCLIQTFPANPEFRDLVQLTNCH
DPDMDFFENMKHMQIHRRARALRKLAKQLTEEKLVLSSKSLQNYIMPYATTAIFNEKMLK
HENMVTASVEVVGAVCRHLSWSAYLYHLKHFIHVLQTGQISPKLGVSLLETVLEAFHFDH
KTLEKQLMTIETQEATAMELEPVVEGEEAMDLEQSEGEEEVVEEKKGENLPEEPAKPEQA
ADTSEDAEQVTKPVSFLPRNKEELECLIKHIQDTVTVNILPKLHRCIVAKVKRDEEHKLV
KSNVVNDDEVVRIPLAFAMVRMMQCLPQEVMEANLPRXILSELLNCCSFIXXXXXXXXXX
XXXIREIARNTLTKIMEVLGVQYLLYILKEMQSALVHGYQLHVLTFTVNLLLKGLTTRLS
AGDLDPCLDILIEIFNQELFGNVAEEKEVKGIVSKVMEARKNKSYDSYEILGKFIGKDQV
TKLILPLKEVLESTTSLKIVRKVHEALRHIMAGLIFNSNMNAESLLLLSHGLISENLPLL
TEKAKKKVAPPPDPRLQPESCLLLQPTPTRGGQKARVSSRTNTYILVDSGLRLLHMSLKR
SKVNSSEEHVLEMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPSVSTNLEPLIK
QLFLLLKEFAKTGIAKGQNFHLVVSCFKCVTILVKNAKSQITSKQLQVLLGFAEEDIYDS
SRQATAFGLLKAILSRKLIVPEIDDVLQKVAQLAITSQSEPVRVQCRQIYLKYILDYPLG
DKLKPNLDFMLAQLEYEYETGRESALEMIAYLLDTFPQDLLHKYCGLFFLSLCMMMINDD
SAKCKKMAALTCKSLLSKINNEKQDLMFSLVTEWFHSKKSSHRRLAAQACGLFVEVEGVM
FERRLEAVLTLIEKEINPINFEDITEEEEEKAADRLLFSFLVLVTKLITECNLIQLTKKS
EVVSNIWGHVQSHLWYPHSWVWLTATEIFGLLFASYKPEDLVDKWRERKAGKRKKTSAEL
SASRVFLTAELDKKMKELAFAFCHQLQSKFLDLSLGEQVIKNLLFVAKVVYLLAPASEEG
KEAEGELGCEVEEQEASEDEEEKDVSVQVEGEREDTEEKGQTPTLLWLMKKLSLMAKREA
AYSPKVPVKRSCIFKFLGAISVDLGKDRIKPYLPTILTPLFRELNSTYAEQDPTLKNLSQ
EIIELLKKLVGLEAFSLAFSSVQKQANQKRAMRKKQRALQAVANPDIAARRKLKRHKNKA
ETRKRKIEFLRPTYKAKRPRSHALKDIAVME
NT seq
8376 nt
NT seq
+upstream
nt +downstream
nt
tttcttaccttttcggagcgcttaagcaatgttaatattgatattattcatcggattgac
agaactggaagctacgctgaggaggtggaaacctatttttctgaaggactacgaaaatgg
agggaactgaacctcactcagcattttgtgcaattctacaatgaagtggccaccaagtgc
cagtccttcaaccagctggtctattaccagagtgccattgtgcagagcttgaaaacacat
ttgcaagttgaaggcagtcttgcttatcaacccctattagatcttgtggtgcagctggct
cgagatcttcagactgatttctatcctcactttcatgactttttcctggccatcaccaag
ttactggatacacaggacacagagctgctggaatgggcttttacctctctttcctatctc
tacaaatacttgtggagattgatggtgaaggacatacacaacatatacagcctgtacagc
accctgctggctcaccacaaacttcacatcagaagctttgctgctgaaagctttgtcttt
ctaatgagaaaggtttctgacaaaaactcaatcttcaatttgatgctcagtgacctgggg
gagcaccctgagaaggtggaaggtgtaggacaactactttttgagatgtgcaagggtgtt
cgaaacatgtttcactcttgtgcagagacggctatgaagttaattctggtaaagttgggg
cctgttaccgaagaagaaattgaactaccgtgggtaactgtaggagaagcctttgagcag
atgatgagatcagctgcagtgcatatccataaggagcattttgacattgtcttcaagtgc
ctggaggagtcactcttagacttgcagaggagaataactaaggccaactgctgtatggct
tcagagcagatggaaaggattctgcaagcttatctgatcctagtgaaacatgcaaatgga
tccaaaatctcactgcctgaacgcgtctgtcagattttaataaaaatgttacaaacacca
gacctctcatcatcttgcnntgnnnnnnnnnntatttctgcatccctgctggccgagaat
gttttcttgcctgattctttgaccaaggaagctattgagaaggtatttgcaagtggattt
gaacggtgctttcttttggacttctctgaagcgatgttcacaatgaagcaatttgagagg
cattttcttccatgctttctggagtacattgagcattgcttctctggcaccgatgccctc
gcaaaggatgaggcaatggcgattctggctaaactcattctggtgaaagcagagcctcct
accgttggttcaatggcatttgagaagtatcctcttgttttcaccgaatcatctgtgagc
tctaatacaagacaacaaacaagtaaaagacaaggaggaaaggcaaaagtaccagtgttg
gatcatgtgctgtctttaatccatttaccagagaaggaagacatcattgatctttcacag
ccttgggttgccttggttgtactcccgcatattagaccaatggacaaagaaaacattgtc
ccctgtgtgacaagttttatagactccctattcacagccattgacaaaggaaacatctac
aaaggaagcctgtttgtggcctgccaagctgtaagtactcttcttagtttggcagagtct
tctgaaatactccatttgttacctgtggagcgtgtcaggagcttggtgaccactttccct
tcagacccctctgccttgctgttggctgatctctattacacgaggttggcattgtgtggc
tgccaggaacccctttctcaagtgaacctaatggacttgtttgagaagttgcatcccaat
atttccactggtgtttccaaggtccggctattgactgttcgaattctaaaccattttgag
aatcccccttctacacagattgagggtgatggcacaggggagctccaaccagtatttgcc
atattgctccaagcagaacttgtgccagcaacagtgaatgattacagagagaaacttctc
catttgaggaaactaagatatgatgtagtgcagtctgcaataccaagtggatctctgcag
gaggtgcctcttcggtatttactgggaatgctttatattaacttcagccctctctgggat
cctgtaattgaactcataacttctcatgcaaaggatatggagaataaacagttctggaag
gtcttgtatgaacatttggagagggctgctacctatgctgaattggagctgcaaaatgaa
ctcgatgaacaggaggaaggcattgctgaaatagaaagcgagaaaatcgagaaaatgtca
ggaggaggggtggggtctgtcttcctggagcagctgaggactagaacagattgcagcgac
cggttggaccacacaaacttccgttttctactatggaaagcactggataagtttccagac
agagtggagcctaggtcaagggaactttccccacttcttttgagatttattagaaatgag
tactacccagcagattcattagtggctccatctcaggatcttagaaagaaaactagtggt
acagtggcagcaaaagaaatacccagtgaagaggtgaatgatgttgaaatggaggaggag
gaagaagaaaaggaagaaggggaaccaattactataggactaccaaaaaagaaaacaaga
agagctgctgctaagcaactaatagcccatttacaagttttttctaaattctcgaatcct
cgtgcattgtatctggagcagaagttgaacgcattatatacccagttactgtcccatcaa
gaccagaatgtacagagaatagctcttgactgtataatgacatacaagcatcctcatcta
ctgccatacagggagaacttgcaaaggctactggaggacaagagttttaaagaagaaata
gtccatttcagtatttctgaggagaccacagtagtaaaaatggagcatcgaccagacctc
atccctgttcttatgagaattctctatggcagaatgagaaacaaaacagggagcaaaaca
cagggcaagtcttcagcaggcactcgcatgtcgatcgttctgcgatttcttgccggctca
ctgccagaagagatacggatgttcttggatctgctctttgaagctgtgaagcaattcagt
aatgggccttgccagactgcagtgcttcgaagtatgtcagagctggatttagctaaagtc
ctgcctcttgggcgtcagcatagcctcttcaatggtctcgaagttgtgttgaaaaacatg
ggacatttgatccatcagtacttgcctgaaattctacagattctgctctgcatgacggct
gtggtaaactgcatcctccagcagagagaaaaggtccaacctaggttgattaatccactg
aagaacttgagacgtcttggactcaagcttgtggtggagtttttctctgattatgagacc
tacagctttagtgtggaagagattgatgcagttttccatgcagtggtatggcctcaggtc
tgcagattggcttcagagagtcagtattctccaacttttctgctcaaactcattcacacc
tggagtaagaatcccaggtatttccccttgctggccaagcagcagccagatcacccagag
tgtgatatactatcaaatgtgtttgctgtcctgtcagccaagaatctgtctgaggccaca
tccagtcttgtgatggacatagctgatagccttctcaacagcccagattttgaacccacg
gaacaggtttccagtttgaatgtgactgacagtgttgtcgtggtcactggagacgtgaca
gaagagaccctcagcctaggttgccgcttggttctgcctcatgttcctgccatacttcag
tacttcagcaaaacaatgttaaatgtggagaaggtgaaaaagaagaagtatagagctcaa
gtcagcaaagagctgagcatactttccaagatcagcaaattcatacaagaaaggagtcag
aattcagtgcttgtgagcctcctcctcccgttcctttatcagagtaacatggaacagggt
acagagattgacattctggagacagtgcagaacttgctgaggcattgctcaaaccctaca
aactttctcaaaccactggcaaagcttttttctgtcatccagaacaaactgtctcggcat
aagttgtgcttggtatttcagactttatctgatttggacagtgaattgacgtatattact
gatgttgttaagctgaacgcctttgatcaacgacacctcgatgatatcgactttgatgta
cgtctgtcagcattccagtcaatcacagcccacatcaaggaaatgcaaacagtggatatt
gacttcctcatccccgttttgcacaactgcttctataccatccagctaggggatatggct
cttagtgacaacgcaagcctttgcttgaccagttttatccgccgactggcagaaatcgac
cacacggaagatgactacaaggagctaatccagcacactctcctggagtctgtaagaaga
gggctgaaaagtaagactgagagcatccagcaggactacacgtcattgctttcctgcctc
attcaaacattcccagcaaatcctgaattccgggatttggtccagttgaccaactgccat
gatcctgacatggacttctttgagaacatgaaacacatgcagatccacaggagggcacga
gctctgaggaaactggctaagcagctcactgaagaaaagcttgtgctgtcttccaaatcc
ctgcagaactacatcatgccttatgctactacggccatttttaatgaaaaaatgcttaag
catgaaaatatggtaacagcctcagttgaagttgttggagctgtctgccgacatctctcg
tggtcagcgtacttgtaccatttaaagcatttcatccatgttctgcaaacaggacagatc
agcccaaagctgggagtcagcttgttagagacagtgctggaagccttccactttgaccac
aaaacacttgaaaagcagcttatgaccattgagacccaagaagctactgcgatggaactt
gagccagtggtggagggtgaagaagctatggatctggagcagagtgaaggggaagaggag
gtagttgaggaaaagaaaggggagaatctccctgaggagccagcaaaacccgagcaagca
gctgacacgtctgaagatgctgagcaagtgaccaaacctgtttctttcttaccccgaaat
aaagaggagctggagtgtctgatcaaacacattcaagatacagttacagtcaacatcttg
cctaaattgcacaggtgtattgttgcaaaggttaaaagagatgaagaacacaagcttgtg
aaatccaacgttgtgaatgatgacgaggtagttcgtattccattagcttttgcaatggtc
agaatgatgcagtgtcttccccaagaagtgatggaagccaacctgccaaggtaaatcctg
tcagagcttcttaactgctgttcatttatcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnaaatccgggagattgcccgtaacaccctcactaaaatcatggaagtgttggga
gtacaatatcttctgtacatcttaaaagagatgcagtccgctctcgtccatgggtaccag
ctccatgtgctgactttcactgtgaacctgttactcaagggccttactaccaggctcagt
gctggtgatctggacccctgcttagatatcctgattgagattttcaaccaagagttgttt
gggaatgtagctgaagagaaggaagtgaagggaattgtctccaaggtcatggaagcacgc
aagaacaagagttatgattcctatgaaattcttggaaagttcatagggaaggaccaggtg
acgaaacttattctgccactgaaagaggttctggagagcaccacaagcttgaagatagtc
cggaaggtgcatgaggcactgcgtcacatcatggcagggctgatcttcaattcaaacatg
aacgcagaatccctcctcctcctcagtcatggtcttatcagtgaaaacttgcctctgctc
actgagaaggccaaaaaaaaagttgcccctcctccagatcctcggctgcaaccagagagc
tgcctgctgctccagcccactcccacaagaggagggcagaaagcacgtgtcagcagcagg
actaacacatatatcttggttgattcaggacttcggctgctgcacatgagcctgaagagg
tccaaagtaaattcttctgaggagcatgttctggaaatgttagatccttttgttcagctg
cttatagactgcctgaaatctatggatgtcaaggtgataactggtgctctgcagtccttg
gtatggattttaaagttccctttgccttctgtcagtacgaatctggagccactgataaag
cagcttttcctcttgctgaaagaatttgccaagacaggaatagccaaaggccagaatttc
cacctggttgtgagctgtttcaaatgtgtaacaatacttgtgaagaatgcaaagagtcag
ataacaagcaaacagctccaagtgttgcttggctttgctgaagaagacatttatgattca
tcacgccaagctactgcctttggccttctcaaggctattttatccaggaagctgattgtc
cctgaaattgatgatgtgctgcagaaggttgcccagctggccatcacaagtcagagtgag
ccggtgcgagtccagtgcaggcagatatacttaaaatatattctggactacccccttggt
gacaagctgaaacccaatttggatttcatgctcgcacaactggagtatgagtatgaaact
ggaagggaatctgcactggagatgattgcctacctcctcgatacgttcccacaggatctc
ctccacaaatactgtgggctgttttttctctctctttgtatgatgatgataaatgatgac
tctgccaaatgcaaaaagatggcggctttgacatgtaaatctctcctcagtaagataaac
aatgaaaaacaagatctgatgttttcgctggtcacagagtggtttcacagtaaaaagagc
tctcacaggaggttggctgcccaggcatgcggtttatttgttgaagtggagggagtaatg
tttgagcggcggcttgaagctgtcctcaccttgattgaaaaagaaatcaacccaattaac
tttgaagacataactgaagaggaggaggagaaggctgcagataggctgctattcagcttt
cttgtgctggtaacaaagctaatcacagagtgcaacttgattcagttaaccaagaagagt
gaagttgtgagcaatatctggggtcacgtgcagtctcacctgtggtatcctcacagctgg
gtctggctgacagctaccgagatctttggccttttgtttgcatcttacaagccagaagat
cttgttgacaagtggagggaaagaaaggcagggaagaggaaaaagacatcagcagagctg
tctgcatccagagtcttcttgactgctgaactggacaaaaagatgaaggaacttgcgttt
gcattctgccatcagctgcagtccaagttcctggacctgtctctaggagagcaggttata
aagaacttgctttttgtggcaaaagtagtttacttgctagcccctgcctccgaagaaggc
aaagaggctgaaggagaactgggctgtgaagtggaagagcaggaggcctcagaagatgaa
gaagaaaaagatgtttctgttcaagtagagggagaaagagaagatacagaagaaaaaggc
cagacacccacattgctatggttaatgaagaagctctctctcatggcaaagcgagaagca
gcatattctcctaaggtccctgtaaagagaagctgcatctttaagttcctgggagcaatc
tcggtggatctggggaaagacaggatcaaaccctaccttccaacaattctgacacctctg
ttcagggagctgaacagcacctatgcagagcaagatccaacactgaagaacctttcccaa
gaaatcattgaactgctcaagaagttagttggactggaggctttttcgcttgccttttct
tctgtgcagaaacaggccaaccagaagagagcaatgaggaaaaagcagagggctttgcag
gctgtggcaaaccctgacatcgctgcaaggaggaagctgaagagacataagaataaagca
gaaaccaggaagcgaaaaatagaattcctgcgccccacctacaaggccaagagacctcga
agtcatgcactgaaagacatagcagtgatggaatga
DBGET
integrated database retrieval system
