Phalacrocorax carbo (great cormorant): 104051217
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Entry
104051217 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104051217
Enzymes [BR:
pcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104051217
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104051217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
104051217
NCBI-ProteinID:
XP_009510523
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
VQRSRNKQLRELFPDGFSIHHAGXXXXXKTEVENLFSNGHIKVLVCTATLAWGVNLPAHA
VIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGVIITTHDKLSHYLTLLTQ
QNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQM
DPGLEKHREQLVIEVGRKLDKARMIRFEERTGFFSSTDLGRTASHYYIKYNTIETFNELF
DAHKTEGDILAIVSKAEEFEQIKVREEEIEELDTLLNDFCELPAPGGVENNYGKINILLQ
TYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWG
WVSPLRQFSVLPPSVLSKLEEKNLTIDKMKDMRKDEIGHMLHHVKIGLKVKQCVHQIPSI
IMEATIQPITRTVLRVRLNIAPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFIIQK
KQVITKEPQLVVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTEL
LDLQPLPITALGRREYEALYKFTHFNPIQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELA
IFRVFNKYPTSKAVYIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAQAD
LIVTTPEKWDGVSRSWQNRSYVQKVSILIIDEIHLLGDERGPVLEVIVSRTNFISSHTEK
PVRVVGLSTALANARDLADWLNINQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMN
KPAFQAIRSHSPAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLKMDEREMNDIIVT
VRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIV
KGTEYYDGKTRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFP
VESSLLEVLADHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPTYYNLDDVSHDTMNK
YLSSLVEKSLFDLECSYCIEIGEDNRSIEPLTYGRIASYYYLKHPTIGMFKDQLKPESNI
EELLLILTNAEEYTDLPVRHNEDQMNSELAKHLPIEVNPHSFDSSHTKTHLLLQAHFSHA
MLPCPDYATDTKTVLDQAIRICQAMLDVAAHHGWLVAALNITSLVQMVVQGRWIHDSSLL
TLPNIEPQHLYLFRKWSQGKRKSACEGKENVFASIVDSDLQTAHISQAWNFLSRLPILNV
SLSIKGCWDDPVQPQNEVPVPAWTTDARDDKRWIKLHADQEYVLQINLQRTQMGYQGKQD
SKAVAPRFPKVKDEGWFLILGEVDKKELIALKRTGYVRNRNTVSIAFYTPETPGRCIYTL
YLMSDSYLGMDQQYDIYLNVVPASTSAQVAPEVAEAGGHLALK
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
gtacagagatccagaaataagcagttacgtgagctgtttccagatggatttagtattcat
catgcaggannnnnnnnnnnnnncaagacagaagttgagaacttgttttctaacggacat
atcaaagtcttagtttgtacagctacgctcgcctggggtgtcaatcttcctgctcatgcc
gttattattaagggaacacaaatatatgctgcaaaaagaggctcctttgttgaccttgga
attttagatgtcatgcagatatttggtcgagctggacggcctcagtttgacaaattcgga
gaaggcgtcattattacaactcatgataaactcagtcattacctgactcttcttactcag
cagaatccaattgaaagccagtttcttgaaagccttgcagacaacctaaatgcagagatt
gctcttggaacagtaactaatgtggaagaagcagtaaagtggataagttacacttatctt
tatgtgcggatgagagcaaatccattagtatatggcatcagtcacaaagcttatcagatg
gatccaggtctagaaaagcacagagaacaactggtaattgaagtcggcagaaaactggac
aaagcccgcatgattcgctttgaagaacgaactggctttttttcttcaacagatttaggc
agaactgccagccactactatattaaatacaatactatagagactttcaatgaattgttt
gatgctcataaaacagaaggtgatattcttgctatagtatcaaaagctgaagaattcgaa
cagataaaggtaagagaagaagaaatagaagagctggataccttactgaatgatttctgt
gaacttcctgctccaggaggtgtggaaaacaattatggaaaaattaatatcctccttcaa
acatatattagcagaggggagatggacagtttctcccttatttcagattctgcatacgtt
gcacagaatgcagctcgtattgttcgagctctttttgagattgcccttaggaaacgttgg
cctgcaatgacatatcgactactgaatctcagcaaagtcattgacaagcggctgtggggc
tgggttagccctttgagacagttctcagtgttaccgccatcagtcctctcaaagttggaa
gagaagaatctcactatagacaagatgaaggacatgagaaaagatgaaataggtcatatg
ctgcatcatgtgaagattgggttaaaggtaaaacagtgtgtccatcaaatcccctccatc
ataatggaagcaacaattcagccaattacccgcacagtgctccgagttcggctgaacatc
gctcctgacttcacatggaacgatcaggtacatggcactgttggagagccctggtggatt
tgggtagaagaccctactaatgatcacatttatcattcagagtacttcatcattcaaaaa
aaacaggtcattactaaagaacctcaactggtggtgttcacaatcccaatttttgaacct
cttccttctcaatattacattcgagctgtgtccgatagatggttaggcgcagaggctgta
tgtatcataaattttcaacatttgattcttccagagagacatccaccccacacagagctt
ctagatcttcagcctttgcctatcacagccttgggacgtcgggaatatgaagccctgtac
aaattcacacacttcaaccctatccagacccagatatttcacacactttatcatacagac
tgtaatgttcttcttggagcacctacaggttctggaaaaactgttgcagctgaattagcc
atcttcagagtttttaacaagtatcccacatcaaaggcagtgtatattgcgcccttaaaa
gcactcgttcgtgaaagaattgaggactggaaagtcaggattgaagaaaaacttggtaaa
aaggttgtagagctgacaggagatgtgactcctgatatgagagctattgcccaagctgac
ctgattgttactacaccagagaagtgggatggtgtcagcagaagttggcagaacagaagc
tatgttcagaaagtttccattcttatcatagatgagatccatctgcttggggacgagaga
ggcccagtgttggaagttatcgtgtctcgaacaaacttcatctcatctcacacagagaag
cctgtaagagtagttggtttatccactgctttagcaaatgccagagacctcgctgactgg
ctaaatattaatcagatgggtctgttcaacttccgaccatcagtacgcccagttcctctg
gaggtgcacattcagggcttccctggccagcattactgtcctcgcatggctagcatgaac
aaacctgcatttcaggcaattcggagtcattctccagccaagcctgttcttatttttgtg
tcatccagacgtcagacaaggcttactgccttagatctgatagctttcctagccaccgag
gacgatcccaaacaatggctgaagatggatgaaagagagatgaacgacattatagtcaca
gttagagattcaaatctgaagctgacacttgcttttggaataggcatgcaccatgcgggt
ctgcatgagagagacaggaaaactgtggaagaattgtttgtgaactgcaaaatccaggtt
cttattgccacaagcacattagcttggggtgtaaattttccagctcatttagtaattgtt
aaaggaacagaatactatgatggaaaaacaaggcgttacgtggattatcccattacagat
gtacttcagatgatgggacgtgctggcaggccacagtttgatgaccaaggaaaagctgta
attctagttcatgatattaagaaggacttctacaaaaagttcctttacgaacctttccca
gtggaatcaagcttgttagaagtgctggctgaccacttgaatgctgaaattgctgctgga
actattacttctaagcaggatgcaatggattatatcacctggacttatttcttccgtcga
cttataatgaacccaacttactataacttggatgatgtgagccatgacactatgaataaa
tacctctcaagccttgttgagaaatctctctttgatttggaatgctcctactgtattgaa
attggggaggataatcgcagcattgaacctctgacatacggccgcattgcttcctattac
tatctgaagcatccaactattggaatgttcaaagatcagttgaaacctgaaagcaatatt
gaagaattgctcttaattctaacaaatgctgaggagtacacagatctgcctgtgagacac
aatgaagatcagatgaacagtgaactggcaaaacatcttccaatcgaagtcaatccccat
tcatttgacagttcacacacaaaaacacacctcctgctgcaagcccacttcagccatgcc
atgctgccttgtccagattatgcaactgatacaaagacagtgctggaccaagcaattaga
atatgtcaggcgatgctggatgttgcagcacatcatggctggctggtggctgctctgaat
ataaccagtctggtgcagatggtggttcagggtagatggatacatgactcttccctgctt
actttgcccaatatagagccgcaacacctctacctttttcggaagtggagccaaggcaaa
aggaagagcgcctgcgaaggaaaagagaatgtttttgcctccattgtggacagtgacttg
caaacagcacacatttcccaggcttggaatttcttgtcccgtttgccaattttaaacgtc
agcctgagcattaagggctgttgggatgacccagttcagccacagaacgaagtgcctgtt
cctgcttggacaacagacgcacgggacgacaaaagatggatcaaattacatgctgatcaa
gagtatgtgctccaaataaatctgcagagaacccagatggggtatcagggaaagcaagac
agtaaagcagtggctcctcgattccccaaagttaaagatgaaggatggtttttgatactg
ggagaagttgataaaaaagaactcatcgccctgaagagaactggatatgtcagaaatcga
aataccgtttctatcgctttttatactccagagactcctggaaggtgtatctacacgttg
tatctcatgagcgacagttaccttggcatggaccaacagtacgacatttacctgaacgtt
gtaccagctagtacctcagcacaagtcgcaccagaggtggctgaggctgggggtcacctg
gctctgaagtaa
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