Phalacrocorax carbo (great cormorant): 104051229 Help Entry 104051229         CDS       T08596                                  Symbol COL4A4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04382   Cornified envelope formation pcao04510   Focal adhesion pcao04512   ECM-receptor interaction pcao04518   Integrin signaling pcao04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pcao00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104051229 (COL4A4)    04518 Integrin signaling     104051229 (COL4A4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104051229 (COL4A4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104051229 (COL4A4)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     104051229 (COL4A4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pcao04147]     104051229 (COL4A4)    00536 Glycosaminoglycan binding proteins [BR:pcao00536]     104051229 (COL4A4) Exosome [BR:pcao04147]  Exosomal proteins   Exosomal proteins of other cancer cells    104051229 (COL4A4) Glycosaminoglycan binding proteins [BR:pcao00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104051229 (COL4A4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  104051229 NCBI-ProteinID:  XP_009510538 LinkDB All DBs Position Unknown AA seq 1409 aa AA seqDB search GGYAYIDTCGGQDCSVCRCFPEKGSRGQPGELGPQGPIGSLGSTGPPGLPGEKGQRGENG QPGPAGEKGDKGPTGVPGFPGLDGVPGLPGSEGPRGKRGLDGCNGARGDPGFPGENGYIG PRGPYGNPGQKGEKGNSVYVSHFEKGPPGERGNPGPPGMPGPRGSRGTKGPSGYPGQPGL PGIPGYPGLPGEQGNPGIGVDGQKGEPGILGRGEKGEKGSPGFPGLQGNPGSYGPAGFPG MKGDPGEKGPPGPPGAVGTPLLPIKGPQGDPGFPGPAGDMGSVGPVGPAGLLGRPGDDGT SLPGLPGVGGAPGPQGFQGDPGFPGTGESIPGRPGFPGPPGLPGQPGRQGLPGLPSVICA DRGIPGEPGAKGQIGLPGRKGEKGEKGNQGLCSCSAGPPGARGMQGPPGIKGKRGPTGVP GFPGQRGNDGRDGELGLPGEKGAEGNSVAPLPGDKGFPGVPGLPGVKGQMGLPGLGFPGP PGARGSPGDIGDTGSIGPPGPKGQKGETVCITLPYPGNPGPPGFKGVQGPKGLKGLPGHP GPNGFDGLKGHRGRPGAGIPGPEGFRGEAGDPGDEGERGSTVDGKTGPPGPPGIDGQKGV PGQPGTPGFPGAKGFRGPEGDIGAPGCPGFPGSPCDMGLPGPPGRRGVMGLPGPQGNKGI QGPQGFPGLPGTQGPMGMSGVKGEEGKMGPPGPSGECGDMGIKGERGPPGGRGCINIHLE KGQKGEPGFPGEKGFRGERGEKGNTGFRGIPGFPGKNGVPGLPGDHGDTGLTGFPGSQGC PGPKGFKGIMGFQGQPGDQGDAGLPGIPGNPGLNGPKGSKGLCGFPGEKGSPGIQGQPGR PGEKGDPGYPGIPGFPGATGPEGVPGEPGEKGKRGILGPPGLPGLAGSQGRKGLPGLPGL DGLDGLKGQKGSAGAPGHSESGPPGYSGELGPKGDRGEPGWPGVSIPGPPGERGFPGFPG RRGPVGPTGPMGRTPDSASPGPPGDQGPPGLDGIRGQPGIPGPPGETIFVRGDPGDIGVR GAPGNPGQRGQQGARGLPGNQGRGGPKGPMGIHGPQGPPGALGQQGDQGFQGKPGLKGPT GDPGEPGKTDDSCPTIPGPPGEAGQRGDDGTVGLPGPIGHPGPQGRKGEEGSCGLPGQDG LPGAPGPPGDQGNTGEQGYAGPRGPPGQTGIPGPPGPRVRSASGFLLVLHSQSDREPPCP QGMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFNTMPFAYCNINQVCYYASRNDKSY WLSSAAPLPMTPLSEEEIQPYISRCAVCEAPAQAVAVHSQDQSIPPCPVNWRSLWIGYSF LMHTGSGDQGGGQSLMSPGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWLTTVMPELQF ASAPLSGTLKEGREQRNKISRCQVCLKHG NT seq 4230 nt NT seq  +upstreamnt  +downstreamnt ggaggatatgcatatattgacacatgtgggggacaggattgttcagtttgtcggtgcttt ccagaaaaaggatcaagaggtcagcctggtgagctcggacctcaaggtccaattgggtcc ttgggatctacaggaccgcctggtctgccaggggaaaaaggacagagaggtgagaatggg cagcctgggccagctggagaaaaaggtgataagggcccaactggagtcccaggatttcct ggtttagatggtgttcctggattaccaggaagtgaaggacccaggggcaagcgtggttta gatggctgcaatggcgcaagaggagatccaggatttccaggcgaaaatggttatattgga ccaagaggtccttatggaaacccagggcaaaaaggagaaaaaggaaattcagtatatgtt tcacattttgaaaaaggacctccaggagaaagaggtaatcctggaccccccggcatgccc ggacctagagggtcaagaggtacaaagggcccgtctggatacccaggccaacctggcttg cctggtattccaggttaccctggattgccaggtgaacagggaaatccaggtattggagtg gacggacaaaagggggagccgggtatacttgggagaggagaaaagggtgaaaaaggcagt cctggattccctggattgcagggaaatcctggttcttatggacctgcaggttttcctgga atgaagggggatccaggagaaaaagggcccccaggtcctcctggagctgttggaactcca ctgcttcctataaaaggtccacaaggagatcctggatttccaggtcctgcaggtgatatg gggtcagttggaccagttggtcctgcaggcctgctcggaagaccaggagatgatggaaca agtctgcctggcctgccaggagtaggtggggcaccaggacctcaaggttttcaaggtgac cctggttttcctggaacaggtgaatcaatcccaggaagacctggatttcctggaccacca ggcctaccagggcagccaggaagacaaggcttacctggactacccagtgtaatctgtgct gacagagggatccctggagaacctggagcaaaaggtcagataggccttccaggaagaaaa ggtgaaaaaggagaaaaaggaaatcaaggcctctgctcgtgtagtgctggtcctcctggt gcccgtggtatgcaaggacctccaggaataaaaggtaaaagaggtcctactggggttcca ggatttccaggccaaagaggtaatgatggcagagatggggaactaggattgcctggggaa aaaggagctgagggtaattctgtagcaccactgccaggtgataaaggattccctggggtc ccaggacttcctggggtaaaaggacagatgggattgcctggtttggggtttcccggccct ccaggagcaagaggtagccctggagacattggtgataccggtagtattgggccacctggt ccaaagggccagaaaggtgagactgtctgcattacattaccataccctggaaatccaggt cccccaggttttaaaggtgttcaaggaccaaagggtttaaaaggactccccggtcatcct ggaccaaatggctttgatgggctaaaaggccatcgaggcaggccaggagcaggaatccct gggccagaaggctttcgaggcgaagctggtgatcctggtgatgaaggtgaaagaggatct acagttgatggtaaaactggccctccaggtccacctggcatagatggtcagaagggtgtt ccaggacagcctggtaccccaggatttccaggtgccaaaggttttagaggcccagaaggt gatataggagcaccaggctgtccaggcttccctggttcaccatgtgacatgggcttacca gggccaccaggacgcagaggtgtcatgggtctgccaggacctcaaggaaacaaagggatt caaggaccccaaggattcccaggactcccaggaacacaaggcccaatgggaatgtccggc gtaaaaggtgaagaaggaaaaatgggtccacctgggcctagtggagaatgtggggatatg ggaataaaaggtgaaagagggcctccaggaggccgtggctgcattaacatccatcttgag aaaggacaaaagggggaaccagggtttcctggtgagaaaggatttagaggtgaaagaggt gaaaaaggcaatactggtttcagaggcatcccaggatttccagggaagaatggtgtccca ggactgccaggtgaccatggcgacactgggctgacggggtttccaggatcacagggttgc ccaggaccaaagggctttaaaggaattatgggttttcaaggacaaccaggtgaccagggt gacgctggcttaccaggaatccctggaaatccaggactgaatggcccaaaaggatctaaa ggactctgtggattcccaggagagaagggttcaccaggtatccaagggcaacctggaaga ccaggagagaagggtgaccctggatacccaggaatacctggatttccaggagctacaggt cctgagggcgtgccaggagaacctggagaaaaagggaaacgtggaattttgggacctcca gggttgccaggattagctggatcccaaggcagaaaaggtcttcctggactgccaggactg gatggcttggacggactaaaaggtcaaaaaggttctgcaggagctccaggtcatagtgaa tcagggcccccaggatactcaggagaacttggaccaaaaggggacagaggtgaacctgga tggcctggtgtttctattccaggcccccctggagaaaggggattcccaggattcccaggt agaagaggacctgttggacccactggacctatgggaagaactcctgatagtgcttctcct ggtcctccaggtgaccaaggaccacctggtttagatggcatcagaggtcagcctgggatt cctggtccacctggagagactatctttgtgcgaggagatccaggtgatattggtgttcga ggggcaccaggtaatcctgggcagcgagggcaacaaggagccagaggtcttccaggaaac caaggaagaggaggcccaaagggtcctatgggaatccatggcccacagggtccacctggt gctctaggacaacaaggagaccaaggtttccaaggaaagcctggtctcaaaggtcccacg ggtgacccaggtgaaccaggaaaaacagatgattcatgccctacaatcccagggcctcct ggggaagcagggcaaagaggagatgatggcactgtagggttaccagggccaataggtcac cctggaccccaaggaagaaaaggtgaagaagggtcatgcggcctgccaggtcaagatggc ttacctggggcacctggaccaccaggtgaccaagggaatacaggagagcaaggatacgct gggccacgaggtccacctggccagactggtatcccaggaccaccaggcccccgtgttaga tctgcaagtggattcttgcttgtccttcacagccagtcagacagagaaccaccctgtcca caggggatgccaaaattatggactggctatagtctgctgtacctggaaggacaagagaaa gctcataatcaagatcttggtctggcaggatcttgtcttcctgtatttaataccatgccc tttgcttactgtaacatcaaccaagtttgttactatgccagtcgaaatgataagtcttac tggttgtcaagtgctgctcctttgccaatgacgccactctctgaagaagaaatacaacca tatataagcagatgtgctgtatgtgaggccccagcccaagcagtagcagttcacagccaa gatcagtcaattcctccctgcccagtgaactggaggagtctttggataggatattctttt ttgatgcacactggatctggtgatcagggtggcggacaatcccttatgtcacctggaagt tgcctagaagacttcagatcagcaccattcattgaatgccagggtcagcggggaacatgt cagttttttgctaatgaatacagtttctggctaacaaccgtgatgcccgaattgcagttt gcatcagcccctctgtcaggaactcttaaagaaggacgagagcagaggaacaaaatcagt agatgccaggtgtgcctgaagcatggctaa

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