Phalacrocorax carbo (great cormorant): 104051289
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Entry
104051289 CDS
T08596
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104051289 (CASC3)
03015 mRNA surveillance pathway
104051289 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104051289 (CASC3)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104051289 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104051289
NCBI-ProteinID:
XP_009510607
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
ESEDGIEGDAVLSDYESAEDTEAEEEDYSEEESAKVELKQDSNDSCESAAKAGKGDEKPD
PKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQT
QEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDDIKPRR
MRKPRGAAKFGSPPQRDPNWSNERPNKPPRHQGADSTSAPPRTFTNRSSAGTGRMPPPRN
YPRMGGYKETRPSYRASEANVQHLSRNGEQVKQESNYRAKRAEQTPPRDKSPEMEAAHVH
GSPVKEEVETQATAADAAQPPPDRPIEKKSYSRARRTRIKAGDAGKLTDEVPASEGLTPV
PPKPVQAETSPPPAKSSNWESPVESSLDGLEQEMTQMNLTEQNWTPGQSQFIQPRELRGI
PNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIMEGHYYDPLQ
FQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGDDPAPQRGTRQL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gaaagcgaggatggcattgaaggagatgctgtactctcagattacgaaagcgcagaagac
actgaggcagaggaagaggattacagcgaggaagaaagtgccaaagtggaactgaaacag
gatagtaatgattcctgtgagtcagcggcaaaagcagggaaaggggatgagaaacctgac
cccaaaggtgctgtaactggtgagaggcaaagcggggatgggcaggagagcactgaacct
gttgagaataaagtcgggaaaaaagttcccaagcacctggacgacgatgaggaccggaag
aacccggcttacatcccgcgcaaagggctcttctttgagcacgacctccgagggcagacg
caggaggaggaggtcaggccaaagggtcgtcagcggaagctgtggaaggacgagggccgg
tgggagcacgacaaattccgggaggacgagcaggcccccaagaccaggcaggagctgatc
gcgctctatggctatgacatcaggtcagctcacaaccccgatgacatcaagccgaggcgg
atgcgcaaaccaaggggagcagcaaagtttgggagtcctcctcagcgagacccaaactgg
tccaacgagaggccaaataagcccccaaggcaccaaggtgcagacagcacttcagctccc
ccccgaaccttcaccaacaggagctctgcaggcacagggaggatgcccccaccgaggaac
tacccaaggatggggggctacaaggagacccgtccaagctaccgagcttcggaagcaaac
gtccagcatctgtctcgtaatggcgagcaagtgaaacaggagagcaactatcgagcaaag
cgtgcagagcaaaccccaccaagagacaagtcacccgagatggaagcggcacatgtccac
ggcagcccggtgaaggaggaggttgaaacccaagccacggctgctgatgctgcacagcca
ccgccagacagaccaatcgaaaagaagtcttattcccgggcaagaaggaccagaatcaaa
gctggggatgcagggaagctgacagatgaagtgcccgcttcagaagggctgactcctgtg
cctccaaaacctgtgcaagccgagacgtcccccccaccagccaagagcagtaactgggag
tcaccggtagaatccagcttggatggacttgagcaagagatgacccaaatgaatctcact
gagcagaactggactccggggcagtcgcagttcatacagccccgggagctgaggggtatt
ccaaaccatatgcacgtgggaactgggccaccgcctcagtttaacaggatggaggaaatg
gcggtgcaggggggccgcgtgaagcgctactcgtcgcagcggcagagaccaccggtgccg
gagcctgccccccccatgcacatcagcatcatggaagggcactactacgacccactacaa
ttccagggaccaatctacacccacagtgagaacccagccccgctgccgccccaagggatg
atcgtacagccagaaatgcacctccctcatccaggtgatgatccagctccccagcggggc
accaggcagctg
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