Phalacrocorax carbo (great cormorant): 104051424 Help Entry 104051424         CDS       T08596                                  Symbol BRIP1 Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao03440   Homologous recombination pcao03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:pcao00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     104051424 (BRIP1)    03460 Fanconi anemia pathway     104051424 (BRIP1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pcao03400]     104051424 (BRIP1) Enzymes [BR:pcao01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      104051424 (BRIP1) DNA repair and recombination proteins [BR:pcao03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      104051424 (BRIP1)    FA (Fanconi anemia) pathway     Downstream FA components      104051424 (BRIP1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD_2 Helicase_C_2 DEAD HBB ResIII Motif Other DBs NCBI-GeneID:  104051424 NCBI-ProteinID:  XP_009510763 UniProt:  A0A093R258 LinkDB All DBs Position Unknown AA seq 1261 aa AA seqDB search MSSDVSEYTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA LSWQQSLYEKSPLTSSCEKEDRKPETSPPCHCTCHSQSKSNEAATSLNHGASCSSNNYET GSSVKPGSPLTNREYNENETLASKLSAKKRLSLCDKENDDFQVDRKRIRLLETEQQVRKR HCFAKGVQLVDALEVYNKKKNGELIVHSEKSVKPTTFSTKIPSGPCTECSCSSGKETDKG TNNAKKKENGDRSFIPKIFFGTRTHKQISQITRELKRTAYSSVPMTILSSRDYTCIHPVV SSSGSNRNEMCVELLEGKHGKSCLYYHGVHKLSEHHALQSAHRLYQAWDIEDLVSLGKKL RACAYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDCARESVS YGVTESQLRAAQEELDFMVNNNIRQKDHEPLRAVCYNLTHWLQESSSQLVERGYETSYKV WSGREMLAILHKMGITSITFPILQKHLATVLEKEEKISVFGREELAEIPVVSPATQIVLK GLFMVLLCLFKDNSRYADDYRVALQQTYAWMNGNQLDVSDTSAFFTRPKHKRSLRQKAVV HMLNFWCLNPAVAFSNLSDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVW VGTVGAGPNGRKLCATFQHAETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKDR WMHTGLWRNLELVKTVIAEPQGGAKSDFDELLKMYYDAIKCKGEKDGALLIAVCRGKVSE GLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKNTRGLLPGSQWYEIQAYRALNQ ALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIRHHENFGSALESLHAFAIR NQKSIDCSSECSSEFLHVPSNSKDPSQASQQEATIHLSPDVPAKSEEQNLVSENNFNTTI SSANPTAPNQPSGQKVDVESHSHHVAQRRNHMDSTPKMSATKIERGKQDGWTNADLTKEH CCFKPLTSTPLPVAKNCVSTASSKQKNVNTACELIDSVNQCRSSLISEHKPSVPESCLET TNFSVKNTEAPVAEEHPDKLQLQVEPCSEFPSAGGKPELPMLNILDEDEDEDESIFFTPE LYDDVESEEQKIRPLVPTCNANENQTECGNSTVADDLFAINTSERLSVTKKMIDDDGRST SLHEIMQNEGSKNSAVHNVEMTSEIKAEQIAAQEMDTKKQKISLSRSRNKGVSFLLNNSS T NT seq 3786 nt NT seq  +upstreamnt  +downstreamnt atgtcttccgatgtgtcagaatatactattgggggagtgaagatcatgttcccttgcaag gcttacccttcacaacttgctatgatgaatgctattgttaagggcttaaataacaggcaa cactgtttgttggagagccctacaggaagtggcaaaagcttggcattgctttgttctgca ttatcatggcaacagtctctgtatgagaaatcaccgcttacatcgtcatgtgaaaaggaa gacagaaagccagagacctcaccgccctgtcactgtacctgtcattcccaatcgaagagc aatgaggctgcaacaagtttgaatcatggtgcttcttgttcttctaataattacgaaaca gggagttccgtaaaacctggaagcccgctgacaaacagagaatataatgaaaatgaaacg ctagcttcgaaattgtctgccaaaaaaaggttatctctatgtgacaaagagaatgatgat tttcaagtagacaggaaaaggattcgtcttttagaaactgagcagcaggttagaaaacgt cattgttttgcaaaaggagtgcagctagttgatgctttagaagtttataataaaaaaaag aatggagagctgattgttcactctgaaaaaagtgtgaaacccactactttttctaccaaa ataccttctggaccttgcactgagtgttcctgttcttctggaaaagaaactgataaaggt actaataacgcaaagaagaaagaaaatggagaccggtcgttcattcccaaaatatttttt ggaacacgaacacacaagcaaatatcccagattactagagagttgaagagaacagcgtat tccagcgtccctatgacaattctttctagccgggattatacctgtattcatccagtggta tctagtagtggtagtaacaggaacgaaatgtgtgtagaattgctggaaggaaagcatggc aagtcctgtctttactatcacggtgttcataagctcagtgagcaccatgccctacagtct gcacacaggttgtatcaggcttgggacattgaagatctagtgagtctgggaaagaagctt cgggcctgtgcatattttgcagccagagaactaatggtgggcgccgatattgtgttttgt ccttataactacctcctagacccccagattcgtgagagtatggaaattaacctaaaaggc caagtagtcattttagatgaagcccataatattgaggactgtgctcgggagtcggtgagc tacggcgttacagaaagtcagctaagagctgctcaagaagagctggatttcatggtcaat aacaacatcaggcagaaggatcatgagccccttcgggctgtgtgctacaacttgacacac tggttacaggagagctctagtcaactagtagaaagaggatatgaaacttcctataaggtt tggagtggaagagaaatgctcgccatcttgcacaaaatgggaataactagtattactttt cccattttgcagaaacatcttgctactgtcctggaaaaggaagaaaaaatatccgtgttc ggcagagaggaacttgctgagataccggttgtgagcccggccactcagattgtgctgaaa gggttgttcatggttcttttatgtcttttcaaagataatagcagatatgcggatgactac agagttgctctacaacaaacttatgcttggatgaatggaaaccaacttgatgtttcagat acaagtgccttctttacacggcccaagcataaaaggagtttgcggcagaaagccgtagtc cacatgctcaatttttggtgcttgaatcctgccgtggctttttcaaacttaagtgatgtc agaacaattgttctgacatctggtacgctctctccaatggattcattttcttcagagctt ggtgtgaagttttctattcagttggaggcaaatcacgttattcggaactcgcaggtttgg gtcggcaccgttggagcaggccctaacggtcggaagttgtgtgccacgttccagcatgca gagacctttgagttccaagatgaggtgggagcacttctgctttcagtgtgtcaaacagtt ggccaagggattttgtgctttttgccatcctataagctgttggacaaattaaaagatcgc tggatgcacactggcttatggagaaacctggagctggttaagacagtcattgcagagcct caaggaggggcaaagagtgactttgatgaactgctgaaaatgtactatgatgcaataaaa tgtaaaggagaaaaagatggagccctccttatagctgtatgcagaggaaaagttagtgaa ggcttggatttctgtgatgagaatgcccgtgcagttataaccataggtattccgtttcca aatgtgaaagaccttcaggttgaattaaagagaaagtacaatgatcagcacaaaaataca agaggccttctaccagggagtcagtggtatgaaattcaagcttacagggctctgaaccaa gccctgggaaggtgtataagacataggaatgactggggtgctcttattttagttgatgac cgcttccggaataaccctaataagtacataactggattatctaaatggattcgtcaacaa atccggcaccatgaaaattttggtagtgcccttgaatccttgcatgcgtttgctataaga aaccaaaaaagcattgattgttcatcagagtgcagcagcgaatttctccatgtaccttca aattcaaaagacccgtcacaagcctctcaacaagaggcgactattcatctctcaccagat gttcctgctaaaagtgaggagcaaaatttggtttcagaaaataattttaatacaaccatc agctcagctaatcctacagcaccaaaccagccaagtggccagaaagttgatgtagagagc cattctcaccacgtagcacaaagaagaaaccatatggactccacacccaaaatgtcagca actaaaatagagagaggaaaacaggatggttggactaatgctgatcttacaaaagaacat tgctgctttaaaccactgacttctacacctttgcctgtagccaagaactgtgtgtccaca gctagtagcaaacaaaagaatgtgaacacggcttgtgaacttattgatagtgtaaatcaa tgccggtcatcattaatttcagaacacaagccaagtgtaccagaatcatgtttggaaaca actaatttttcagttaaaaatactgaggctccagttgctgaagagcatcctgataagctg cagcttcaagttgagccctgcagtgagtttccttcagcgggagggaagcccgaacttcca atgttaaacatattggatgaagacgaagatgaggatgagagtatcttcttcacaccagaa ctctatgatgatgtagaatcagaggaacagaaaatcagaccactggttccaacctgcaat gcaaatgagaatcagactgaatgtggaaactccacagtcgctgatgatctttttgcaatc aacacgtcagaaagactaagtgtgactaaaaaaatgattgatgatgatggcagaagcaca agtttacatgaaataatgcaaaatgaggggagtaagaatagtgcagttcataatgtagag atgactagtgaaataaaagcagagcagatagcagctcaagagatggacaccaaaaaacag aaaatcagtctttccagatcacgaaataaaggtgtgtcttttctattgaacaatagtagc acatag

DBGET integrated database retrieval system