Phalacrocorax carbo (great cormorant): 104051434
Help
Entry
104051434 CDS
T08596
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04120
Ubiquitin mediated proteolysis
pcao04137
Mitophagy - animal
pcao04144
Endocytosis
pcao04340
Hedgehog signaling pathway
pcao04350
TGF-beta signaling pathway
pcao04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104051434
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104051434
04350 TGF-beta signaling pathway
104051434
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104051434
04137 Mitophagy - animal
104051434
09144 Cellular community - eukaryotes
04520 Adherens junction
104051434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104051434
04121 Ubiquitin system [BR:
pcao04121
]
104051434
03029 Mitochondrial biogenesis [BR:
pcao03029
]
104051434
Enzymes [BR:
pcao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104051434
Membrane trafficking [BR:
pcao04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104051434
Autophagy
Mitophagy
Other mitophagy associated proteins
104051434
Ubiquitin system [BR:
pcao04121
]
Ubiquitin ligases (E3)
HECT type E3
104051434
Mitochondrial biogenesis [BR:
pcao03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104051434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
104051434
NCBI-ProteinID:
XP_009510773
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
HQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIE
VSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGL
FQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKP
IQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNIPVTEE
NKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLND
WKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAA
GPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
1249 nt
NT seq
+upstream
nt +downstream
nt
ccatcaatgccagctaaaagagcccagccagcagcctctgccagctccaaatgaggggtc
actagaagatggtgaggagttgcctgcacaaagatatgaaagagacttggtacaaaagtt
gaaagttcttagacatgagctctctcttcagcaaccgcaggctggtcactgccgcattga
agtatccagagaggaaatatttgaggaatcctaccgtcagataatgaagatgaggccaaa
ggacttgaaaaagaggcttatggtgaaatttcgaggagaggaaggcctggattatggagg
agtagcaagagaatggttgtatttactgtgccatgaaatgttgaatccctattacggact
cttccagtactccacagataatatttacatgctgcaaatcaatccagactcttctatcaa
tcctgaccatttgtcttatttccattttgttggtcggataatgggtttggctgtgttcca
tggacactatatcaatgggggtttcacagttcccttttacaaacagcttctggggaagcc
cattcagctctctgatctggaatccgttgacccagaattacacaaaagtttggtctggat
cttagagaatgacatcaccccagttctggaccatactttttgtgtggaacacaatgcttt
tgggcggattttacagcatgaactcaaaccaaatggcaggaatattccagtgacagaaga
gaacaagaaagaatatgtcaggttgtatgtaaactggcgatttatgagaggaatagaggc
acagtttctggctctgcagaagggttttaatgaacttattcctcaacatctgcttaagcc
tttcgaccagaaggaacttgagctaatcataggaggcctggataagatagacctgaatga
ctggaagtcaaacacacgtctaaagcactgcatggcagatagcaatatcgtgaagtggtt
ctggcaagcagtggaaacgtttgatgaagaaaggagggcaaggctgctgcagtttgtgac
gggttcgacgcgtgtcccacttcaaggtttcaaggctttacaaggttctacaggcgctgc
aggacccagactgtttaccatccatttaatagatgcaaacacagacaaccttccaaaagc
ccacacttgctttaaccggattgacattccgccttatgagtcatacgagaagctttatga
gaagctgttgacagctgtggaagagacatgtgggtttgctgtggagtga
DBGET
integrated database retrieval system
