Phalacrocorax carbo (great cormorant): 104051451 Help Entry 104051451         CDS       T08596                                  Symbol ATG4A Name (RefSeq) cysteine protease ATG4A   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04136   Autophagy - other pcao04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:pcao00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104051451 (ATG4A)    04136 Autophagy - other     104051451 (ATG4A)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:pcao01002]     104051451 (ATG4A)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pcao04131]     104051451 (ATG4A)    03029 Mitochondrial biogenesis [BR:pcao03029]     104051451 (ATG4A) Peptidases and inhibitors [BR:pcao01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    104051451 (ATG4A) Membrane trafficking [BR:pcao04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     104051451 (ATG4A) Mitochondrial biogenesis [BR:pcao03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     104051451 (ATG4A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  104051451 NCBI-ProteinID:  XP_009510790 LinkDB All DBs Position Unknown AA seq 459 aa AA seqDB search MAAEGGRRSLLRGFSRGVRGCEGFGLAEPASRVSAAGGGRPEGEQSAVPEAPLTLHRLCV QPSEKILSRYENQITILSDYLEEFPETDEPVWILGRQHHLNTDKSKLLLDVSARLWFTYR RKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILRCF LDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVV IEDIKKMCWSPPQSSSAAHSSAHLHRSALGRNKNAAGFCTGWKPLLLIIPLRLGINHINP VYIDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSFVDWEENGTVDDQ SFHCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQKHPP HWPPFIPPAKPEVTTTGAELIESTDKLFELEEEFEILSV NT seq 1380 nt NT seq  +upstreamnt  +downstreamnt atggccgcggaggggggacgccgttccctcctgcggggcttctcccgaggggtgaggggc tgtgaaggctttgggctcgcagagcctgcgtcccgtgtaagcgcagcgggcggtgggcgt cctgagggcgagcagagcgcggtgccggaggctcccctcaccctgcatagactctgcgtg cagccttcggaaaaaattttatctaggtatgaaaaccagatcactattctgtcagactac ttagaagaattcccagaaactgatgagccagtgtggattctgggaaggcaacaccaccta aacacagacaaatctaagttattgttggatgtaagtgctcgtctctggtttacgtataga aggaagttttcgcctattggaggcaccggtccttcgtctgatgctggctgggggtgcatg ctgcggtgtgggcagatgatgctggcacaagcactgatctgcagacacttaggaagagat tggcaatgggaaaaacacaaaaaacaaccagaagaatatcacagaatcttacggtgcttt ctagatagaaaagattgctgttattccatccaccaaatggcacagatgggtgttggagaa gggaaatcaattggagaatggtttggaccaaatacagttgctcaagtactgaagaagctt gctttgtttgatgaatggaattcactagcagtttatgtatctatggacaatacagtggtc attgaagacatcaagaaaatgtgctggtcccctccgcagagcagcagcgcggcccacagc agcgcacacttgcacagaagtgctcttggccgaaataagaacgcggcaggattctgcaca ggctggaagcccctcttgcttattatacctctacggctagggataaatcacataaatcca gtatatattgatgcatttaaagaatgctttaagatgcctcagtctttgggagcattagga gggaaaccaaataatgcctattatttcataggatttttaggcaatgagctgatctacttg gaccctcacaccactcagagttttgtagattgggaagaaaatggcacggttgatgaccag agcttccactgccagcaagccccacacaggatgaagatcatgaatttggacccttcggta gctttaggcttcttttgcaaagaagaatgtgattttgataactggtgtagtcttgtacaa aaggagattctaaagcaacagagtctacggatgtttgagctggtccagaagcatccacca cactggcctcctttcatacctccagcgaagccagaggtgacaaccacaggagcagaactc attgaatctactgacaagctatttgaattggaagaagaatttgaaatcctgagtgtatga

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