Phalacrocorax carbo (great cormorant): 104051477
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Entry
104051477 CDS
T08596
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
pcao
Phalacrocorax carbo (great cormorant)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
104051477
NCBI-ProteinID:
XP_009510829
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All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MRLPLLCASVMLMSLSQCRAVSFPEDEDPINIVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEVPKSEVTPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRSDEMVFVCGTNAFNPMCRYYQLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIEINGVPMVVGVFTTQLNSLSSCNYFSNFTASXXXXXXXXEKVFKGRFKEQKTPDSV
WTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPSVTEEPWFT
KTRVRYRLTAIAVDHAAGPYQNYTVIFVGSEAGVVLKILAKTRPFSLNDSVLLEEIEAYN
HAKCNAESEEDRRVISLQLDRDHHALFVAFSSCVIRIPLSRCERHGSCKKACIASRDPYC
GWLDHEACGRVTPGMLGAYVQDVEYGNTAQLGDCHEILPTTATPDYKIFGDPTSDMEFSS
ASITTMASIPVISPKVIGSWKPKVTGSRKFVVQDDPNTSDYSDPLSGVPKGVRWEVQSGE
SNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDLFVRKSRKIHKDAESAQSCTDSSGSF
AKLNGLFDSPVKEYQQNIDSPKLYTNLLTNRKELPPNGDTKSMMMEHRGQPPELAALPTP
ESTPVLQQKTLQAMKSQSDKAHSNLNASRKETPLKSPQFFPSSPPPHSPLSHGHIPSAIV
LPNATHDYNTSFSNSNVHKTDKKMQHLDHPLTKPSSKRDHRRSVDSRNTLNDFLKHLNET
TNNPKAIMGDIQVAHQTLMLDPMGNMSEIPPKVPNREASLYSPPSTLPRNSPTKRVDVPT
TPAVPMTSLERQRGYHKNSSQRHSISALPKNLNSPNGVLLSRQPSINRGGYMAPTAGTKM
DYMQGTPVSVHLQPSLSRQSSYTSNGTLPRTGIKRTPSLKPDVPPKPSFVPQTTSVRPLN
KYSY
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttcctctgctttgtgcctccgtgatgctaatgagtctgtcccagtgcagagcc
gtcagcttccctgaagatgaggaccctattaacattgttgactaccactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgaatctcagcacagactggacttccaa
ctgatgttgaaaattcgagacacactttatatcgctggcagggaccaagtttacactgta
aacttaaatgaagttccaaaatcggaagttactccaagcaagaaattaacatggaggtca
aggcagcaggacagagagaactgtgctatgaaaggcaagcataaagatgaatgccataac
ttcattaaagtctttgttccaagaagtgatgagatggtgtttgtctgtggaacaaatgca
tttaaccctatgtgcagatactatcagctgaataccttagagtatgatggggaggaaatt
agtggtttggcaagatgcccatttgatgccagacaaaccaatgtcgccctctttgctgat
ggaaaattgtattcggcaacagtagcagatttcctggcaagtgatgctgttatttatcgc
agcatgggggatggatctgccctaagaacaataaagtatgattccaaatggataaaagaa
ccacacttcctccatgccatagaatatgggaactacgtttatttcttcttccgagaaatt
gcggtagagcacaataatttaggcaaggctgtgtattcccgtgtggcacgtatatgcaaa
aatgacatgggggggtcccaaagagtcctagaaaaacattggacatcctttctgaaagct
cggctcaactgctctgttcctggggattcattcttctactttgatgttctgcagtctatc
acagacataatagaaatcaacggagtccccatggttgttggtgtattcaccacacagctt
aacagtctgagttcttgcaactatttttctaattttacagcatcnnnnnnnnnnnnnnnn
nnnnnnnttgagaaagtcttcaaagggagatttaaagaacaaaagacccctgactctgtt
tggacagctgtacctgaagacaaagtgccaaagccaagacctggctgctgtgcaaaacac
ggcctagcagaggcttacaaaacctccattgatttcccagacgaaacactctccttcatc
aaatctcatcctttgatggattcagctgtcccctcagtcactgaggagccctggtttacc
aaaacacgtgtcagatacagattgacagcaattgctgtagaccatgctgctggaccctac
cagaactacacagtcatatttgttggctctgaagcaggagtagtacttaaaatcttggca
aagaccaggcctttttcactgaatgacagcgtattactggaagagattgaagcatataat
catgcaaagtgtaatgctgagagcgaggaggatagaagagtaatttcccttcagctggat
agagaccaccatgctctgttcgtggcattctccagctgcgtcattagaattcctctgagt
cggtgtgagcgtcacgggtcatgtaaaaaggcatgtattgcttcacgggacccatactgt
ggctggttagaccacgaggcatgtggaagagtgacaccaggcatgctcggagcatatgta
caagatgtcgaatacggcaacacagcgcagcttggggactgccatgaaattttgcctact
acagctacaccagattacaaaatatttggcgacccaacatctgacatggagttctcctca
gcttccattaccacaatggcaagtatcccagttatatcacctaaagtgattggttcctgg
aaacctaaagtgactggctctcggaaatttgtagttcaagatgacccaaacacttctgat
tattctgatccattatcaggtgtcccaaagggtgtaaggtgggaagtgcaatcaggagag
tccaaccaaatggtacatatgaatgttctaatcacttgtgtctttgccgcttttgtcctg
ggagcctttattgcgggagtggctgtttactgttaccgggatttatttgtacggaaatcc
agaaaaatacacaaagatgcagaatcggctcagtcctgtactgactccagtgggagcttt
gctaaactgaacgggctttttgatagtcctgtcaaggaatatcaacaaaacattgattca
cccaaactttacacaaacctgttgactaacagaaaggagttgccgccaaacggtgatacg
aagtccatgatgatggaacacagggggcagcctccggaattagctgcgcttccaactcct
gaatctacaccagttcttcaacaaaagactctgcaggctatgaaaagtcagtcggacaaa
gcgcatagtaacctcaatgcttcacgaaaggaaaccccactaaaaagccctcagtttttt
ccttccagtcctccaccccactctcctctaagtcatggacatattcctagtgctatcgtt
cttcccaatgctacccatgattacaatacatctttctcaaattctaacgtgcacaagaca
gacaaaaagatgcaacatcttgatcatccacttacaaaaccatccagcaaaagagaccac
aggagatctgttgattccaggaacaccctgaatgattttctgaaacacttaaatgaaact
actaataatcccaaagcaattatgggagatattcaagtggcccaccagactttaatgctg
gatccaatgggaaatatgtctgagatcccacctaaggttcccaacagggaggcatcttta
tattctcccccatcaactcttccgagaaacagccccacaaaacgagtggatgttcccacc
acgcctgcagtaccaatgacctctttggaaagacagagaggttatcacaaaaattcatca
caaaggcattcaatatctgcccttcctaaaaacttaaactcaccaaatggtgttttgtta
tccagacagcctagcattaatcgtgggggatacatggctcccacggcaggcacaaagatg
gactacatgcaagggacgcctgtcagcgttcacctccagccttccttgtccaggcaaagc
agttacacaagcaatggcacccttcctcgtacaggaataaagaggacaccctccttaaaa
cccgacgtgccaccaaaaccctcattcgttcctcagacaacgtcagtcagaccactgaac
aaatacagttactag
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