Phalacrocorax carbo (great cormorant): 104051492
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Entry
104051492 CDS
T08596
Symbol
PCDH20
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104051492 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcao01009
]
104051492 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcao04515
]
104051492 (PCDH20)
Protein phosphatases and associated proteins [BR:
pcao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104051492 (PCDH20)
Cell adhesion molecules [BR:
pcao04515
]
Cadherins
Protocadherins
104051492 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
ORF45
Motif
Other DBs
NCBI-GeneID:
104051492
NCBI-ProteinID:
XP_009510855
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
TLASRGLGGQYVQLDNRSGELHTSAVEIDREALCVESSGATVFGGAAAVSSSSSLPSSES
CLLLLDVLVLPQEYFRLVKXIAIRDVNDNAPRFPVPHIHLSVPENAPVNTRLAIEHPAFD
PDIGTNGVQTYRLRDNYGVFTLDVEENESGERTPYLIVMGALDREAREEYVTVIIAEDGG
TPPLVGSATLTIGISDINDNCPQFSDSQLNVTLYGNSSLGTHVATVRAVDMDLGSNAQIT
YSYSQKVPQPSRDLFHLDESTGTITLSSKVDGDTLRLHRLIILGNGPGCIPAVITVLVTI
IKVMMRPPEVIPRFIANEVEGVVYLKELEPINTPIAFFTIKDPDEKYKVNCYLDGDGPFR
LSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEGFHVNKIIKVQVLDDNDNSPIFS
QQLIELSIEENNVPNAFLTKLHATDADSGERGQVSYFLGPDAPSYFSLDKTTGVLTVSTQ
LDREEKEKYRYTVKAVDSGFPPRESIATVAITVLDKNDNSPRFINKDFSFFVPENFPGFG
EIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYVLWIEAVD
GGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGM
NAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHST
VMVNLFVNDTVSNESYIESLLRKEPDISIEEKQPQISIEPTHKKMESASCMPTLVALSII
SLGSIALVTGMGIYICLRKGKKHHRADENLEVQIPLSGRISLHMLEKKPMEISNI
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
accctggcctcccgtggcttggggggacagtatgtgcagctggacaaccgctccggagag
ctgcacacctcggccgtagagattgaccgggaagctctgtgcgtggagagcagtggggcc
accgtctttgggggagcagctgctgtctcttcctcctcctccctaccctcatctgagtca
tgcctgctgctgctggatgtgctggtgctgccgcaggagtacttccgcctggtgaagnaa
attgctatccgggatgtcaacgacaatgcgccccggttccctgtgccccacatccatctc
tctgtgcctgagaatgcaccggtaaacacacgcctggctattgagcaccccgcctttgac
cctgacataggcaccaacggtgtccagacctaccgcctgcgagataactacggtgtcttc
accctggatgtggaggagaatgagagtggggagaggactccctacctgattgtcatgggg
gctctggacagggaggcacgggaggaatatgtcacagttatcattgctgaggatgggggg
actcctccgcttgtgggcagtgccacgctcactattggcatcagtgatatcaatgacaac
tgcccccagttcagcgactcacagctcaatgtcactctttatgggaattctagtctagga
acgcatgtggccactgtccgtgcagtagacatggaccttggatccaatgcccagatcacc
tactcctacagtcagaaggtcccccagccatccagagacttgttccacctggacgaaagc
acaggaaccatcacgctctccagtaaagttgatggggacactctgaggctccacaggctg
atcatactgggcaacggtcctggttgtatccctgccgtgatcacagtgctagtgaccatc
atcaaagtcatgatgaggccacctgaagtcatccctcgtttcatagctaatgaagtggaa
ggggtggtatacttaaaggaactggagcctatcaacacaccgatagcattttttaccatc
aaagaccctgatgaaaaatacaaagtcaattgctatttggatggtgatgggcctttcaga
ctttcaccgtacaagccatacaataatgaatacctgttagagaccacaaagccattggac
tatgagacacagcagctctatgaaatctctgtagttgcatggaactcagaaggatttcat
gtcaacaaaataatcaaagtacaggtcctggatgacaacgacaactcaccaattttctct
caacagctgatagaattatccattgaggagaacaatgttcccaatgcgttcttgaccaaa
ctgcacgctacagatgctgacagcggagaaagagggcaagtgtcctattttttagggcct
gatgccccttcctatttttctttagataaaaccacaggagttcttacagtttccacccaa
ctggacagagaagaaaaagagaaatacagatatactgtcaaagcagtagattctgggttc
cctccaagagaatcaatagcaactgtcgccatcactgtattggataaaaatgataacagt
ccaaggtttatcaataaggatttcagcttttttgtgccagaaaactttccaggttttggt
gaaattggagttataagtgtcacagatgctgatgcagggcaaaatggatgggttgccctt
tcagttctgaatggaagcgatatttttgtcatagatactggaaagggagttttgagagct
aaagtctccctggacagggagcagcaaagttcctacgttctgtggatcgaagcagttgat
ggcggtgatcctgccctctcttccactgcaaaaataactatccttcttctggacataaat
gacaacccacctttggtcttgtttcctcaatctaatatgtcttatttgttggtccttcct
tctacccttcctggctctcccatcactgaggtctatgccgttgataaggacactggcatg
aatgcagtcatagcttacagcatcataggaagaagaggccctcgaccggagtcatttagg
attgaccctaaaactggtaatatcaccttggaagagtcactgatgcaaaatgactatggc
ctctatcggctgcttgtaaaagttagcgatcacggctatccagaacctctccattccacc
gtcatggtgaaccttttcgtcaatgacactgttagcaatgagagctatattgaaagtttg
ttaagaaaggagcctgatatcagtatagaagaaaagcagccgcagatatccatagagcct
acgcataaaaaaatggagtcagcatcctgcatgcctaccttggtagctctgtcaataata
agcttgggttccatcgctttagtaacagggatgggcatttacatctgtttaagaaaagga
aaaaagcatcacagagcagatgaaaacttggaagtacaaatcccgttaagtggaagaatt
agcctgcacatgttggagaagaaaccaatggagatttctaacatttga
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integrated database retrieval system
