Phalacrocorax carbo (great cormorant): 104051812
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Entry
104051812 CDS
T08596
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104051812 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104051812 (MSH2)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104051812 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_III
AAA_27
cwf21
Motif
Other DBs
NCBI-GeneID:
104051812
NCBI-ProteinID:
XP_009511232
UniProt:
A0A093R3Q7
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
QVENHEFLVKASFDPNLAELREKMNKLEEKMLSLLNSAANELGLEAGKSIKLETNSQFGH
HFRITCKEEKVLRNNSEYGIVDTQKNGVKFTNSQLSSVNDEYIRTREEYEEAQDAIVKEI
VNIASGYAEPIQTMNDVIAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPC
IEVQDEVVFIPNDIIFEKGKQMFHIVTGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE
VTIVDCILARVGAGDSQLKGVSTFMSEMVETAAILRTASENSLIIIDELGRGTSTFDGFG
LAWAISEYIATKICAFCMFATHFHELTTLAGQVSTVDNLHVTALTSDGTLTMLYRVKEGV
CDQSFGIHVAELAAFPEHVIESAREKALELEEFQNMGKSKESKGEPPAKKCYSERQEGER
IIQDFLCQVKALPLTDMSEDDIKIKLKQLRNDLLAKNNSFVNDIIFQTEVTS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
caggtggagaatcacgaatttcttgtcaaggcttcttttgatcctaatttggcagaattg
agagaaaagatgaacaaactggaagaaaaaatgctgtccttgctaaacagtgcagccaac
gaactaggtctggaagctggcaaaagtatcaaactggagacaaactcacagtttggacat
cactttcgaataacttgcaaggaggaaaaagttctccgtaacaattcagaatatggaata
gttgatacacagaagaatggtgtgaaattcacgaacagccaactgagttctgtcaatgac
gaatatataaggaccagagaagagtatgaagaggctcaggatgcaattgtcaaggaaatc
gttaacattgcttcaggttatgcagaaccaatacagacaatgaatgatgtgatagctcaa
ttagatgcagttgtcagttttgctcatgtgtcaaacggagcaccagtgccgtatgtccgt
cctgtcatcctggaaaagggacaaggaaggattgtgctgaaaggtgccaggcatccttgc
atcgaagtacaagatgaggtggtcttcatccccaatgacattatttttgagaagggcaag
cagatgttccacattgttactggccctaacatgggaggaaaatcaacctatatccgacag
acaggggtgattgttcttatggcccaaattgggtgttttgtaccatgtgaatctgcagaa
gtaaccattgtggattgtatcctggctcgggtgggagctggagacagtcagctgaaaggt
gtgtctactttcatgtctgaaatggtagaaactgctgcaatccttaggactgcatctgaa
aactctctgataatcattgatgagctgggaagaggaacttctaccttcgatggctttggc
ttagcatgggctatttcagaatacattgctaccaaaatctgtgctttctgtatgtttgct
acacattttcatgaactgacaacccttgctggccaagtgtcaacagtagataacctacat
gttactgctctgaccagtgatggcacactgacgatgctttatcgtgtcaaggaaggtgtt
tgtgaccagagttttggaatacatgtagcggagttggctgctttcccagaacatgtgata
gaaagtgcaagagagaaagcattggagctggaggagtttcaaaacatgggcaagtccaag
gaatccaaaggagagccaccagccaagaaatgctacagtgaaagacaggaaggtgaaagg
ataattcaggattttctttgtcaagtgaaagcattgcccctgacagatatgtcagaagat
gacatcaaaatcaagctgaaacagctgagaaatgatctgttggcaaagaacaacagtttt
gtgaatgatataattttccaaacggaagttacatcatga
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