Phalacrocorax carbo (great cormorant): 104051924
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Entry
104051924 CDS
T08596
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104051924 (TRIM71)
04121 Ubiquitin system [BR:
pcao04121
]
104051924 (TRIM71)
Enzymes [BR:
pcao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104051924 (TRIM71)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104051924 (TRIM71)
Ubiquitin system [BR:
pcao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104051924 (TRIM71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
TEN_NHL
SGL
Beta-prop_IFT122_1st
Vgb_lyase
DUF3496
DUF5798
Helicase_dom
Motif
Other DBs
NCBI-GeneID:
104051924
NCBI-ProteinID:
XP_009511370
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
LSIEQAQAVAEQVEMKAKVVQSEVKAVTTRHKKVEKIRQVKAKSLYLQVEKLRQNLNKLD
NTISAELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRA
LQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADVSDQQNGTYLISYRPQLE
GEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKE
GYIIVADRSNNRIQVFKPCGTFHHKFGTLGQDPGLRHKEPSCSVACDISRRIVVADKDNH
RIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNTEGKILVSDTRNHRVQLFGPDGVFLN
KYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFL
RPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMDRPSGIAVTPDGMI
VVVDFGNNRILVF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ctaagtattgaacaggcccaggctgtggcagagcaggttgagatgaaagcaaaggtggta
cagtctgaagtcaaagcagtgactactagacataagaaggtggaaaagattcgccaagtc
aaggctaagtcactctacttgcaagttgaaaagttacgtcagaacctaaataagctggat
aacaccattagtgctgagctgaagaatgtgagaggccttctccagccacaggaagatgac
aggatcatgttcactccccctgaccaggcattgtatatggccattaaatcaatgggcttt
gtcagcagcggggcttttgctcctctgaccaaagccactggggaaggcctcaagcgtgca
ctgcagggcaaagtggcctctttcacagtgataggctatgaccatgatggtgagcctcgc
ctttcaggaggcgacatgatctctgcagtggtgatgggcccggatggaaaccttttcggg
gcagacgtcagtgatcagcagaatgggacctacctgatcagctaccgtccacagctagag
ggagagcacctggtatctgtaatgatgtgcaaccaacacattgagaacagccccttcaaa
gttgtggtgaaatctggacgcagctacattggcattgggctgccggggctgtcctttggc
agtgagggagacagtgacggcaaactctgccgcccctggggggttagtgtagacaaagaa
ggctacatcattgttgctgaccgcagtaataaccgcatccaggtgttcaaaccatgcggg
accttccatcacaagtttggcacgctagggcaagatcctggtctccgacacaaggaacca
tcgtgttcagtggcctgtgacatctcgcgtaggatcgttgtggctgacaaggacaatcat
cgcatccagatcttcacatttgagggtcagttcattctgaagtttggggagaagggaaca
aagaacgggcaatttaattacccatgggatgtggccgtcaacacagagggcaagatcctg
gtctccgacacaaggaaccatcgtgttcagctgtttgggcctgacggtgtgtttcttaac
aagtatggctttgaaggggcactctggaagcactttgattcccccagaggtgtgactttc
aatcacgagggtcacttggtagtgacagacttcaacaaccatcgccttctggtcatccat
ccagattgccagtcagcacgctttctgggctcggagggcaccgggaacggccagttcctg
cgcccgcagggagtggcagtggatcaagaggggcgcatcatcgtggctgattccaggaac
caccgggtgcagatatttgagtcaaatggtagctttttatgcaagtttggcactcaggga
agcggctttggtcagatggaccgtccttcaggtatagccgtcacccctgatggcatgatt
gttgtggtcgactttggaaacaatcgaattctcgtcttctaa
DBGET
integrated database retrieval system
