Phalacrocorax carbo (great cormorant): 104051928
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Entry
104051928 CDS
T08596
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
pcao03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104051928 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104051928 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104051928 (CPSF6)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104051928 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104051928
NCBI-ProteinID:
XP_009511371
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All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
EAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSVGDDVGKGAAPNVVYTYTGKR
IALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKL
MDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPPS
NRGRGRFPGAIPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLP
PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP
GPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPANSGIPTSDSRGPPP
TDPYGRPPPYDRGDYGPPGRRFTGNNMSIREKLHIPFYGRHTKNNTQNSGREMDAARTPL
SEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVL
ISSLQDCLHGIESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERE
RHRDRDRDRDRERDREREYRHR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gaagctgaatatggtggacatgatcagattgatttatatgatgatgtaatttctccatct
gcgaataatggagatgccccagaagatcgtgattacatggattcactcccaccatctgtt
ggggatgatgtaggtaaaggagctgcaccaaatgttgtctatacatatactggaaagaga
attgccttatacattggaaatcttacctggtggacaacagatgaagacttaactgaagca
gttcattcactgggggtaaatgatattttggagataaaattttttgaaaatcgtgctaat
ggccagtctaaagggtttgcccttgtgggtgtgggatcagaagcatcctccaaaaagttg
atggatttgttgcctaaaagagaattgcatgggcagaatcctgttgtaactccatgtaat
aagcaatttctgagtcagtttgaaatgcagtcaaggaaaaccacacagtctggccagatg
tctggggaaggtaaagctggtcccccaggaggaagctcacgagcagcatttccacctagt
aatagagggcgaggccgttttccaggtgccattccaggtggagacagattccctggaccg
gcagggccaggagggccaccaccacctttcccagctggacaaactcccccacgtccacct
ttaggtcctcctggcccaccaggcccaccaggccctccgcctcctggtcaggtcctccca
cctccgttagctggacctcctaatcgtggtgaccgtccaccaccacccgttctgtttcca
ggacagccctttggtcagcctccacttgggccacttcctccaggccctccgccaccagtt
ccaggctatgggccaccaccaggtccgccaccacctcagcagggtccacctccacctccg
ggtccatttccccctcgtccgcctggccctcttgggccgcccctgactcttgctcctcct
ccacatctccctgggccacctccaggtgctccaccacctgcaccacatgtgaatccagct
ttcttccccccacctgccaatagtggcatacctacttcagacagccggggcccacctcca
acagatccatatggccgacctccaccgtatgacagaggtgactatgggccacctggaagg
cgtttcactggaaataacatgtccataagagaaaaattacatattccattctatgggagg
cacacgaaaaataatactcaaaactcagggagagaaatggatgctgcaaggacaccgcta
agtgaagcagaatttgaagaaatcatgaatagaaatagggcgatctcgagcagtgccatt
tcgagagctgtatcagatgccagcgctggggactatggaagtgctatagagaccttggta
actgcaatttccttaattaaacagtccaaagtatctgcagatgatcgctgtaaggttctt
attagctctctccaggactgccttcatggaattgagtccaagtcttatggttctggatcc
agacgtgagcgatccagagagagggaccacagtaggtcacgagaaaaaagtaggcgccac
aaatcacgcagtagagatcgtcacgatgactattatcgggaaagaagccgtgaaagagag
aggcatcgtgatcgcgacagagatcgcgacagagaacgagacagagagagagagtatcgt
catcgctaa
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