Phalacrocorax carbo (great cormorant): 104052082
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Entry
104052082 CDS
T08596
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
pcao04261
Adrenergic signaling in cardiomyocytes
pcao04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104052082
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104052082
09158 Development and regeneration
04382 Cornified envelope formation
104052082
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcao01009
]
104052082
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104052082
03036 Chromosome and associated proteins [BR:
pcao03036
]
104052082
Protein phosphatases and associated proteins [BR:
pcao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104052082
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104052082
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104052082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
104052082
NCBI-ProteinID:
XP_009511542
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MVNFEASLPSVICAMAATYRLMVTSVNCYSSAVIDQHFHHTVHYCTGTCQVFKQGVTCIV
AHHSVCAELSVQDGNIDHKVAVPENGLALPGNEDYHQILPNNPRIKKGSSVQASSSLKDI
TGEAINLASGKIKEFSFEKLKNSSSHVAYRKGRKVRSESFSRRSFDFDLIYGHFSNDENC
PPCGFLQSPSPVEKWQESNNAPEVTMNPIVSFSPHSFEENFITQILEKHKLDGGSGGDIK
VCLDILLKCSEDLKKCTDIIKHCIKKKSADSVGGGNSNDPLANSEKIYMNLMTRFSSYLK
KLPFELKPPGNKEAGDLAELVNCFHGLQQTPFSPVFGDEQPPRYEDIIQLPSSSVVPLGL
PGDQCEVTSTSQSIQTSTVSLTSNSLHSVPQENSMRAVKEVCALPQLPATSPSDCMSSAE
ALYIEEESDGERTLRKTKKAEQKGGWESLERSYQLAGCSDLTADAKAECARVGDVELSHA
SEKITPLKPVSESVLRGSQADVSRGEQICSKVDKDEIDKLLLDLECFSQKMESTLREPSL
KENQPACLQVFGWQGRQVLPLALEPKSKPVDPTSSLSKIMETNGHKMEEDDKALLLRILE
SIEDFAQELVEFQTGKGSLSKEREVMQILQETLTTPSQSLLAGQKSYTGAASRDTAPASI
QQAPEVIKVQSKQEKKPGTSSPVPLNSVVSPCTLLPVNKATSSTPLSINIPRFYFPKGLP
NICTNHEEIIARIKEAFTEFEDEKASICEMGKIAKICGCPLYWKAPMFNASGGERTGCVS
VHSFVSMWRKILCNCHDDASRFTYLLAKPSYDYLEQEDFIPLLQDVVETHPGLTFLKDAP
EFHSRYITTVIQRIFYTVNRSWSGKITLTELRKSNFLQTLALLEEEDDINQITDYFSYEH
FYVIYCKFWELDTDHDLYISQKDLARYSDQALSNRIIERIFSGAVVRGNEVQKEGRMSYA
DFVWLLISEEDKRSATSIEYWFRCMDLDGDGVLSMYELEYFYEEQCERMEVMGIEPLPFH
DLLCQMLDLVKPEREGRVTLRDLKRCRMAHVFYNTFFNLEKYLDNEQRDPFAVQKDIEND
GPEPSDWDRYAAEEYEILVAEESGNEQLQEGSFEEDYDTDEVLSPPETGDKSDKLVISDL
SA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattttgaagcctcacttccaagtgtgatctgtgctatggcagcaacttacagg
cttatggtcacttctgtgaactgctacagcagtgcagtgatagaccagcactttcaccac
actgtgcattactgcacagggacttgccaagtgtttaagcaaggagttacatgcatagtt
gcccatcacagtgtctgtgcagagctcagtgtccaagatggcaacatagaccataaagtt
gctgttcctgaaaatggactggccttgcctggaaatgaagactatcaccaaattctccca
aataatccaagaatcaaaaagggctcttcagtgcaagcctccagcagtttaaaagacatt
actggtgaggcaataaaccttgctagtggtaaaataaaggagttctcctttgaaaagctc
aaaaactcttccagtcatgtggcctacagaaagggaaggaaagttcgatcagaatcattc
agcagacgatcatttgattttgacttgatttatgggcacttcagcaatgatgagaactgc
cctccatgtggctttttgcagagtccctcacctgtggagaaatggcaggagagcaataat
gctccagaagtgaccatgaatcctattgtttctttttcccctcattcctttgaagaaaac
ttcattacgcagattttggaaaagcacaagctagatggtggttctggtggagatattaag
gtgtgcctagacatcttgctcaagtgctcagaggatctgaaaaagtgcacagacataata
aaacattgcatcaaaaagaagtctgcagacagtgttggtggagggaacagcaatgatccc
ctggccaattcagaaaagatatatatgaatctgatgacaagattttcttcgtacctgaaa
aagctaccctttgagctcaagccaccaggaaacaaggaagctggtgacttggcagaacta
gttaactgttttcatggcttgcagcaaactcccttttcccctgtatttggagatgagcag
ccacctaggtatgaagatattattcagctgccatcctcaagtgtggttcctcttggacta
ccaggtgatcagtgtgaggtgacaagcacctctcagtccatccaaacaagtactgtgagc
cttacctcaaactcccttcacagtgtcccacaggagaacagcatgagagctgtgaaagaa
gtttgtgctctacctcagttaccagccacaagcccttctgactgcatgtcttctgctgag
gctctgtacattgaggaggagtctgatggggaaagaacattacggaaaacaaagaaggca
gagcagaaagggggctgggagagtttagagcgcagctaccagctagctggttgttcagat
ttaactgctgatgctaaagcagaatgtgccagagtaggagatgttgagctctcccatgct
tctgagaaaattactcctttaaaaccagtgtcagagtctgtattgcgtggttcccaagct
gatgtctccagaggagaacagatttgcagtaaggtagacaaggatgagatagacaaactg
ctgctggacttggagtgcttctcacagaaaatggagagtactttgagggaaccctctcta
aaggagaaccaacctgcctgtttgcaggtgtttggctggcagggtaggcaggtactacct
ctggctcttgaacccaaaagtaaacctgttgaccccacatcttctttgtcaaaaatcatg
gaaaccaatggccataaaatggaagaggatgacaaagcccttttactgcgtatcctggaa
agcatcgaggactttgcccaggaactggtggaattccagacaggcaaggggagcttgtcc
aaggagagggaagtgatgcagattcttcaggaaactttaacaactccttcacagtcgctc
cttgcagggcaaaaaagctacactggggctgcctccagagacactgctccagcttcaatt
cagcaggccccagaagtgattaaggttcaaagtaagcaagagaagaaacctggaacttca
tccccagtccctttgaactctgtggttagcccttgcactcttctgcctgtgaataaagcc
accagcagtacccctttgtcgataaacattccacgtttctacttccctaaaggacttccg
aatatctgcactaatcatgaagaaatcattgccaggattaaagaagcctttacagaattt
gaagatgagaaagcaagcatctgtgaaatggggaaaattgctaagatatgtggctgcccg
ctctactggaaagcacctatgttcaatgcatcaggaggagaaaggacaggatgtgtatct
gtacactcatttgtatctatgtggagaaaaatcctatgtaactgccatgatgatgcatcc
agattcacataccttttagcgaagcccagctatgactacctagaacaggaggactttatc
ccactgcttcaggatgtggtggaaacgcatcctggcctgacgttcctgaaggatgctccg
gagttccattcccggtacattacgacggttatacagagaatattctacacagtcaatcga
tcctggtctgggaagatcactctaacagagctgaggaaaagcaacttcttgcaaactctt
gctctcttggaagaagaggatgatataaatcagatcacagattatttctcctatgaacac
ttctatgttatatactgtaaattctgggagctggacactgaccatgatctttacattagc
cagaaggatctggctaggtacagtgatcaagctttatcaaacaggattattgagcgaata
ttcagcggcgctgtggtgagaggcaatgaagttcaaaaggaaggccgcatgagttatgct
gattttgtgtggctcctgatttcggaggaagacaaaagaagtgctacaagcattgagtac
tggtttcggtgcatggatctggatggggacggagtgctctccatgtatgaactggagtac
ttttacgaggagcagtgtgagcggatggaagtgatgggcatagaaccactgccatttcat
gacttgctgtgtcagatgcttgatctcgttaagccagagagggaaggaagagtaaccctg
cgagacctgaagaggtgcagaatggctcatgtattctacaacaccttctttaatttagag
aaatatctggacaatgaacagagggatccctttgcagtacaaaaggacattgaaaatgat
ggccctgaaccctctgactgggacagatatgctgctgaagagtatgagattcttgtggct
gaggagtctgggaatgagcagttacaagaaggatcatttgaagaagactatgacacagat
gaagtcttatctccccctgaaactggagacaagtcagacaaactagttatctcagatctc
tcagcatag
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