Phalacrocorax carbo (great cormorant): 104052305
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Entry
104052305 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04010
MAPK signaling pathway
pcao04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104052305
04020 Calcium signaling pathway
104052305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcao04040
]
104052305
Ion channels [BR:
pcao04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104052305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104052305
NCBI-ProteinID:
XP_009511846
LinkDB
All DBs
Position
Unknown
AA seq
1572 aa
AA seq
DB search
MYHGIESQGGVRSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEA
TNQKLALQKAKEVAEVSPMSAANISIAAKQQNSSKSKSVWEQRTSQIRMHNFXXXXXXXX
NELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRGEGRNNISKLSPVDVQEVEQTKVSST
DGAEAPRKHHRHRDKDKLGEQEKGDVAKDENGESGANSKEERHRQHRSRSKEVEGGSKEG
KSDRNRGQEGGKRHHRRGSVEEGAEKEHRRHRTHRHSAERQGKEGNGTINGARSERRSRH
RGGSRSGNREGEPGSKGENGEEPHRRHRFRNRALSTYDSVEKENGEKEGETGEKEHRNHQ
PKENQCEIEASGSVSVPVHALPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPV
TITAPPGETTVIPMNNVEFESKTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFH
YIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMID
LGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKR
LPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRG
QYLDYEKNEVEAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGP
SPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAI
SAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLK
CLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINL
SFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNI
ALDDETSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKNECGSD
FAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACC
RIHYKDMYNLLRVIAPPLGLGKKCPHRVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTA
LEIKLASGGVKQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFD
FYKQNKNSREQVHQPSGGLCQPGPVSLFHPLKATLEQTQPTAFNNAKAFLRQKSSASLNN
GGALPAPEGGIKESSSWGTQRTQDVFYETRTPAFERGHSEEIPIERVVEMREISPTLTNG
EHQPGLESQGRXSMPRLAAETQRSKARSPGSYLAPIPDTSPMKRSVSTLTPQRPHAMHLY
EYSLERMPPEQGHHHHHHRCHRRKEKKQKSLDRSPHQLADGEAVAQSGESSSKDKKQERG
RSQERKQHSSSSSEKQRFYSCDRYGSRDRSQPKSADQSRPTSPNGGPEQGPHRQGSGSVN
GSPLLSTSGASTPCRGRRQLPQTPLTPRPSITYKTANSSPVHFTSFQTGLPTFSPGRLSR
GLSEHNALLRGD
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatgggatagagtcgcagggtggcgtccgctcggggatgttctcctccatttac
ttcatcgtcctgacattgtttggtaactatacgctcctgaatgtcttcttggctatcgct
gttgacaatctggcaaatgcccaagagctgacgaaggacgaggaggagatggaggaagcc
accaaccaaaagctcgccctgcagaaggccaaggaagtggcagaagtcagccccatgtct
gcagctaacatttccatagccgccaagcagcagaactcctccaaatccaagtccgtttgg
gagcagaggaccagccagatccggatgcacaacttccnnnnnnnnnnnnnnnnnnnnnac
aacgagctggatccggaggagcgggtgcgttacgctaccacccttcacatcaggccagac
atgaagactcatctggatcggccgctggtggtagagccgaggggcgaagggaggaacaac
atcagcaagctgagccccgtggatgtgcaggaggtggagcagaccaaagtcagctctact
gatggggcagaagctccacgaaagcaccaccggcatcgggataaggacaaactgggagag
caagagaagggtgatgtggccaaggatgagaacggggaatccggcgcaaacagtaaggag
gagcggcacaggcagcacaggagccgcagcaaggaggtggaaggggggagtaaggagggg
aaaagtgatcgcaacaggggtcaggaagggggaaagaggcaccatcgccgagggtcggtg
gaagagggtgccgagaaggagcaccgtaggcatcggactcaccggcactctgctgagcga
caaggcaaggaaggcaacgggacaatcaacggggcgaggagcgagcggcgttcccggcac
cggggagggtcgaggtctgggaaccgggaaggagaacctgggtccaagggtgagaatgga
gaagagcctcacagacggcacaggttcaggaacagggcgctgtcgacgtacgattcggtg
gagaaggagaacggcgagaaggagggggagactggcgagaaggagcaccggaatcatcag
cccaaggagaatcagtgtgagattgaggctagtggaagtgtgagtgtccctgtgcacgcc
ctccctagcacctatctgcagaaagtgcctgaacagccagaagatgctgacaaccagaag
aacgtgacgcggatgattcagccacctctggacaaaaccaccactgtgaatatccctgtc
actatcactgccccgccgggggaaaccactgtcataccaatgaacaatgttgaatttgaa
agtaaaacagaggagaagaaagacgtcgatgacttgacaaaaaacgggcctaaaccaatc
ttgccttacagttccatgtttatcctaagtcctacaaatccaattcggcgtctgttccac
tacatcgtcaacctgcgctatttcgagatggtcatcctcatagttatagccctcagcagc
attgccctggctgcagaagaccctgtccaagccgagtcaccgaggaatgatgcgctgaaa
tacttggattatatatttacaggtgtcttcacctttgagatggtgatcaagatgattgac
ttggggctgttactccaccctggctcctacttccgtgacctgtggaatatcctggacttc
attgtggtcagtggggccttggtggcatttgccttctcaggaaccaaaggcaaggacatc
aacacaatcaagtcactgcgagttctgcgggtcctaagaccgctgaagaccattaaacgg
ctgcctaaactaaaggctgtctttgactgcgtggtgaattctctgaagaacgtcctcaat
atcctcatagtttacatgctcttcatgttcatttttgccgtcattgctgtgcagctcttc
aaaggcagattcttctactgcactgatgagtcgaaggagctggagaaggactgcaggggt
cagtaccttgactatgaaaaaaatgaggtggaggcacagcccagagaatggaaaaaatac
gagttccactatgacaacgtgctttgggctctgctcacgctcttcactgtctccacgggc
gaagggtggccaactgtgctgaagcactcggtggatgctacctacgaggaacagggtccc
agccctggctaccgaatggaaatgtctatcttttacgtggtgtattttgttgtcttccct
tttttctttgtgaacatctttgtggcgttaatcatcatcaccttccaagagcaaggagat
aaagtgatgtcagagtgcagcctcgagaaaaatgagagggcctgcatagacttcgccata
agtgccaagccactgacccggtacatgcctcagaacaagcagtcttttcagtacaagatg
tggaaatttgtggtgtcccctccctttgagtattttatcatggtcatgattgcactcaat
accattgtcctaatgatgaagttctatgatgctccagaagcatatgaagaaatgttgaaa
tgcctgaatattgtgtttacatccatgttttcaatggaatgtgtgctgaagatcattgcc
tttggtgtgctgaattacttccgagatgcctggaatgtctttgattttgtaacagtgttg
ggaagtattactgatattttagtaacagagattgcggacacggacaacttcatcaacctc
agcttcctgcggctcttcagggcagcgagacttatcaagctccttcgccagggttacact
atccgcatcttgctctggacgtttgtgcagtcttttaaggccttgccttatgtgtgtctc
ctcattgcaatgctcttcttcatctatgccattattggcatgcaggtatttggaaatatt
gcactagatgatgaaacctccattaatcggcacaataacttccgtaccttcctccaagcc
ctgatgcttctgttcaggagcgccacaggggaagcctggcacgagatcatgctgtcgtgc
ctgagtaacagagcctgtgacccactctccggcctcaccaaaaatgaatgcggcagcgat
tttgcctatttctacttcgtgtctttcatcttcctgtgctccttcctgatgttaaacctg
tttgtggctgtgattatggacaacttcgaatacctgacaagagactcctccatccttggg
ccccatcatctggatgagtttgttcgtgtctgggctgaatatgacccagctgcctgttgc
cggattcattataaggatatgtacaatttgttacgtgtaattgctccacccctgggctta
ggaaagaagtgccctcatagggtggcatacaagcgcctggtgcggatgaacatgcccatc
tcgcctgaagatttaaccgtccacttcacatccacgctgatggccttgatccgcactgcc
ctagaaatcaagcttgcctcagggggtgttaaacagcaccagtgtgatgctgagctgaga
aaggagatctcactggtttggcccaatctgtcccagaagactctggatttgctggtgcct
cctcacaaacctgatgagatgactgtggggaaggtctacgcagcgctgatgatattcgac
ttctacaagcagaataagaacagcagggaacaagtccaccagccatctggaggcctgtgc
cagcccgggcccgtgtcgctcttccacccgctgaaggccactttggagcaaacccagccc
acagcattcaacaacgcaaaggcgttccttcgccagaaaagctcggcctcactcaacaac
gggggcgccctgccagccccagagggtgggatcaaagagtccagttcttgggggacccaa
cgcacccaggacgtgttttatgaaaccaggacaccagcttttgaacgaggccactcagaa
gaaatccccattgaacgggtggtagaaatgagggaaatcagccccacgcttaccaatgga
gagcaccagccaggcctggagagccaggggcggncttccatgccgcgcctggctgccgaa
actcagaggagcaaagcacggtcacctgggagttacctagcacccatcccggacacgagc
cccatgaagcgctccgtctccacgctgaccccacagcgtcctcacgccatgcacctctac
gaatactctttggagcgcatgccgccggagcaagggcatcaccaccaccaccaccgctgc
cacaggcggaaagagaagaagcagaagtccttggacaggtccccccatcagctggccgat
ggagaagctgtggcccagtctggcgagtcttcttccaaggacaagaagcaggaacgcggc
cggtcccaagagaggaagcagcactcttcctcctcctctgaaaagcagcgcttctattcc
tgcgaccgctacggcagccgggaccggtctcagcccaagtctgccgatcagagcaggccc
acctcacccaacggagggcctgagcaaggtccacacagacagggcagtggttcagttaat
gggagccccttgctgtcgacatctggtgctagtaccccatgccggggtcggaggcagctc
ccacagactccactaaccccacgccccagcatcacttacaagaccgctaactcctcgccc
gtgcacttcaccagtttccaaaccggcctgcccactttctccccgggacgcctgagccgc
ggcttgtccgagcacaacgcgctgctgcgcggggac
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integrated database retrieval system
