KEGG   Phalacrocorax carbo (great cormorant): 104052306
Entry
104052306         CDS       T08596                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
pcao  Phalacrocorax carbo (great cormorant)
Pathway
pcao03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pcao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    104052306 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcao03400]
    104052306 (WDR48)
DNA repair and recombination proteins [BR:pcao03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     104052306 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_NWD2_C WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 WD40_like Nucleoporin_N Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 104052306
NCBI-ProteinID: XP_009511881
LinkDB
Position
Unknown
AA seq 639 aa
QVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHT
DWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASA
GLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVW
DPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGV
WALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPPALWVA
TTKSSVNKWTLKGIHNFRASGDYDNDCTNPIPPLCTQPDQVIKGGASIIQCHILNDKRHI
LTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWFSVDLKTGMLTITLDE
SDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHINPMDEEENEINHVNGE
QENRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVIDITV
DKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNESQTTS
SSNNEKAGEQEKEEDIAVLAEEKIELLCQDQVLDPGPST
NT seq 1920 nt   +upstreamnt  +downstreamnt
caggtttcctatgtgattagagatgaagtggagaagtataaccgaaatggggtaaatgca
cttcagctggatccagcattaaacagactcttcacagcaggccgagactctattatacgg
atatggagtgtcaatcagcacaagcaagacccttacatagcatctatggaacatcacaca
gattgggtaaatgacattgtgctctgctgcaatggtaaaacattgatatctgcttcttca
gatactactgttaaagtgtggaatgcgcataagggattttgcatgtcaacactaaggacg
cataaggattacgtaaaagccttagcatatgcaaaagataaagaactggtagcatctgcc
gggctggacagacagatattcctctgggatgtaaatactttaacagcactgactgcctca
aataacaccgtaacaacttcttccctgagtgggaacaaagactctatctacagccttgca
atgaatcaaatgggaacagtcattgtatcagggtccactgaaaaggttctaagggtgtgg
gacccgagaacttgtgcgaaactaatgaaactcaaagggcacacggacaatgtaaaagct
ttgttgttgaacagagatggcacccagtgtctttcaggcagctctgatgggactatccgc
ctgtggtcccttgggcagcagagatgtatagccacgtatcgagtccatgatgaaggtgtt
tgggctctgcaggtcaatgaagccttcactcatgtttattcaggaggaagagacaggaag
atttattgtacagatttacgaaatcctgatatccgtgtgcttatctgtgaagaaaaagca
ccagttcttaagatggaacttgatagatcagctgatcctcctccagcactttgggttgca
acgactaagtcctctgtgaataaatggactttgaagggaattcataattttagagcatct
ggagattatgataatgattgtaccaatccgataccacccctgtgtacacagcctgaccaa
gttataaaagggggtgctagtattattcagtgccacattcttaacgacaagagacacata
ttaaccaaagacacaaataataatgtggcatactgggatgtcttgaaggcatgtaaagtt
gaagaccttgggaaagtagattttgaagaggaaattaagaagagatttaaaatggtgtat
gtgccaaactggttctcagtagacttgaaaactgggatgttgacaattactttggatgaa
agtgactgctttgcagcctgggtgtcagcaaaggatgctggatttagcagtccagatggt
tccgatccaaaattaaaccttggcgggcttctgctacaagcacttctggagtattggcct
agaacacacatcaatccaatggatgaagaggagaatgaaataaatcatgtgaatggtgag
caggagaacagaatccagaaaggaaatggatactttcaagtgccaccacatactccagtt
atttttggtgaggctggaggacgcactttgttcaggttattatgtcgggattcaggtggt
gaaactgaatctatgcttcttaatgaaactgtgccacaatgggtaattgacatcactgtg
gataaaaatatgcccaaattcaataagattcccttctacctccagcctcattcatcatca
ggggccaaaactctaaaaaaagaccggctgtcagcaagtgatatgcttcaggtgagaaaa
gtgatggaacacgtgtatgagaaaatcataaacttggataacgagtctcagacaactagc
tcctccaacaacgaaaaagcaggcgaacaggaaaaagaggaggacattgctgtgctagca
gaggagaagattgaactcctgtgccaggaccaggttttggatccgggaccttcaacataa

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