Phalacrocorax carbo (great cormorant): 104052309
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Entry
104052309 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104052309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
Ig_2
LRR_9
LRR_EndoS
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
104052309
NCBI-ProteinID:
XP_009511853
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSXXXXXXXXNGLA
NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR
LSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQGLMH
LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHNPWNC
NCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPADLNV
TEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDTGLYT
CMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVTSWET
TNMTTSFTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAVMLVI
FYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYKSPFN
HTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgctggctcttcagcttcttgtggtggctggt
ctagtgagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaagtg
atttgtgtacggaaaaatctgagagacgtgccagacggcatctccaccaacacccggtta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaagcatctgagg
cacctagaaatcctgcagctcagcnnnnnnnnnnnnnnnnnnnnnnnnaatggtctggcc
aatctcaacactttggaactctttgacaatcgtctgaccactatcccaaatggggctttt
gtatacctgtcaaaactgaaggaactgtggttgagaaacaaccctattgagagcatccct
tcttatgcttttaacagaatcccttctctccggaggttggatttgggggaattgaaaagg
ctttcatacatctcagaaggtgcctttgagggtctgtctaacttgaggtatttgaacctt
gccatgtgcaatcttcgagagattcctaacctcaccccacttgtaaaactggatgagtta
gatctttctgggaatcacctgactgccatccggccaggttctttccaagggttaatgcat
cttcagaaattgtggatgatacagtcccagattcaagtgatagaaaggaatgctttcgat
aaccttcagtcacttgtagagatcaatctggcacataacaatctaacactgctgcctcat
gacctgttcacaccactccgcctagaaaggatccacttgcatcacaatccttggaactgc
aactgtgatatcctttggctcagctggtggattaaagacaaggcaccctccaatactgcg
tgctgcgcccgttgccacacacctcccagtttaaaaggaaggtacattggtgagctggac
ctgaattacttcacatgttatgctccagtcatagtggagccaccagcagacctcaacgtc
acagaaggcatggctgcagagatgaaatgccgggcatcaacctccctgacctctgtatct
tggattactccaaatggatctgttatgacacatggggcgtacagagttcggattgctgtg
ctcagtgatggcacattaaattttacaaaggtaacagtgcaagacacaggtttgtataca
tgcatggtgagtaactctgttgggaataccacagcttctgccacactgaatgtgactgct
ctggataaccctggttacacatacttttcaactgtcacagtagagactgtggaaccttct
caggatgaggcacagaccacagagcaggttgggcccacaccagttaccagctgggagacc
actaacatgacaacctcattcactccacagagcacaagatcaacagaaaaaacattcacc
attcctgtgacagatgcaaacaacgggatcccaggaatagatgaggttatgaagacaaca
aaaatcataattggttgttttgtggctatcactctcatggctgctgtgatgctggtaatt
ttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctccaacacggactgta
gagatcattaatgtggatgacgagcttacaggtgacacgcccatagagagtcacttgccc
atgccagcaatagagcatgagcacctaaatcactataactcttataagtctcctttcaac
cacacaacaacagtcaacacaataaattcaatacacagttcggtgcatgaaccgttattg
atccgaatgaactcaaaagacaatgtacaagagactcaaatctaa
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