Phalacrocorax carbo (great cormorant): 104052384 Help Entry 104052384         CDS       T08596                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188 homolog   KO K14311   nuclear pore complex protein Nup188 Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:pcao00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     104052384 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pcao03019]     104052384 (NUP188) Messenger RNA biogenesis [BR:pcao03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      104052384 (NUP188) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like Motif Other DBs NCBI-GeneID:  104052384 NCBI-ProteinID:  XP_009511940 LinkDB All DBs Position Unknown AA seq 1728 aa AA seqDB search SSRELWTILLGRSALREPAQIAAELNKHWQRLLEGLSYYKPPSTTSAEKIKADKDVAAPM KELGLRVSKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQALMLKLADYYYE ERICILRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELVPNYRKQFEALYKAEAPTWETH GNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPDELLAFAKMFKEQGFGTRQTNR HLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNDRIHQEMDNQLL QLGDVSHHALVLLAWALLRHTVNPEESTNIIRRMGSTAIQLNVFQYLTKLLRSLSSGGKN CTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWKTEPTAGLGI ILDSVCGMFPHLLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHKPPDVISHEDG TLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTLFTCEIEMLL HVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLTTVISPPVDV IASCVDCLTVLAARMPAKVWTDLHHTGFLPFVANPVSSMNHMISAEGMNAGGYGNLLMSI EQPQGEYSVTISFLNLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKWRYNSHGVRE KIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIMGIGVDTIDM VMASQSSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQHGAHGNNLI AVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLTRLQSKIEDM RIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVLELIDSKQQE RYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPPPSESSELSV LDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKLLAYHVAETEGS SCASMTEYQMLISAWRMLLIISTSHADIMHLTDSAVHQQLFLDVLNGTKVLLLVPMSVSC LQLGSMLCTLLLILLKQWKSELGSVDKIINSLTQILEGVLQADQQMMEKTKAKVFSALIT VLQMKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDATDDKDSMETDDASR VKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQITRKVPVLPTIFAALEISLRVKQNLHF TEASLHLLLTLARTQQGAAAVAGAGVTQSVCLPLLSVYQLSTNGAIQTSASSRKSLDAPS WPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSLACLEEADHT VGFILQLSNFTKEWHFHLPQLMRDMQVNLCYLCQACTSLLHSRKMLQHYLQTKNGDSLPS SVTPRVQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKSLAALRHFTPDVCQILLD QSLDLAEYNLLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKEPFPQAAGLN MQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSELSTLLSSLS RYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR NT seq 5188 nt NT seq  +upstreamnt  +downstreamnt gagcagcagagaattgtggacaattcttctgggcagatcagctttaagggaaccagcaca gattgcggcagagttgaacaagcactggcaaagattattagagggactttcatactataa accgccaagtacgacttctgcagaaaaaataaaagctgataaagatgtagctgctccaat gaaagagttgggtctgagggtcagcaagtttttggggctggatgaagagcagagtgtgca gttgttacagtgttatcttcaagaggattacagaggaacaagggactccctgaagacagt tcttcaggatgaaaggcagagtcaggctctgatgcttaagcttgctgactattactatga agagaggatctgcattctgcgctgtgtcctccatctacttacttattttcaggacgagag gcacccttacacagcacaatacttccagtgtgttgaaaagttggacaaggaactagttcc taattaccggaaacagtttgaagcactgtacaaagcagaagctcctacatgggaaacaca tggaaatctcatgacagaacgtcaagtttcccggtggtttgtgcaatgtctccgtgaaca gtccatgctcctggaagtcatcttcctctactatgcatactttgaaatggcgcctgatga gcttctggcatttgcaaagatgttcaaagaacagggatttggcactagacaaaccaacag acatttggtagatgagagcatggatcacctggtagatcgtattggctactttagtgctct tattctggtagagggcatggaaatagattccctccatgagcgtgctttggatgacaggac ggaggagcacaagttagccaataatgaccgcatccaccaggagatggacaatcagctgtt gcagttaggggatgtctcacatcatgctctggtccttctggcctgggctctgctccgtca cactgtaaatccagaggagtcaacaaacattatcaggagaatgggcagcactgctatcca gctgaatgttttccagtatctgacaaagcttctgcgatcgctgagcagtggggggaagaa ttgtactgccagcacagcttgtatgtgtatttatggacttctttcctttgtcctgacatc actggaattacatacattgggcaatcagcaggatataattgatgctgcatgtgaagttct ggcagcttccagcattcctcagctcttctggaagacggaacctactgcgggtctgggtat tatcctggacagtgtgtgtgggatgttcccccatcttcttactcctctccttcagctgct ccaagcccttgtgtctgataaatctactgcaaaaaaggtatacagtttcctggataaaat gtccttctatatcgaactgtacaagcataaacctcctgatgtgatctctcatgaagatgg cacactttggcgaagacaggccccaaagctcctctatccacttggactaggtcaaacaaa tctgcggatacctcagggaacagtgggccaagtgatgctggacgatcgggcttatttggt acgatgggagtattcctacagcagctggacactgtttacctgtgagattgagatgctgct ccatgtcgtatcaacagcagatgtgattcagcattgccagagggtcaagccaataattga tctggttcataaagtcatcagcactgatgtatcaatagcagattgccttctgccaatcac atcacgaatctacatgctcctgcagaggctaacaactgtaatctctccccctgtggatgt tattgcttcttgtgtcgattgtttgacagtactggctgctcggatgccagccaaggtttg gactgaccttcaccatacagggttcttaccatttgttgccaatccagtgtccagtatgaa tcacatgattagtgcagagggaatgaatgctgggggctatggaaacctattgatgagcat agaacagcctcaaggcgagtacagtgttaccatctccttcctgaacctgatcacgactct ggtccggggacagcttggtagcacgcagagccaaggacttgtgccttgcattgtgtttgt cctgaaggagatgttaccaaattaccacaaatggcgttataactctcatggagtaagaga gaaaattggatgccttattctgcagttgatccatgctatactgaatttgtgccctgaaat ggatcctcgcagcagcaatgcccccagccttcagtccttgtgcatcttcagcctggccaa cactgaagcagggcaggctgtcattaacatcatgggaattggtgtggacactattgatat ggtaatggcctcccagtctagcagtgatgagtcacaaggtcaaggtcaactgctgatcca aacagttaagctggcattctcggttaccaataatgtcatccggttgaaacctccctctag tgtggtatctccattagaacaggcacttactcagcatggtgctcatggaaacaatcttat tgcggtcttggccaaatacatttaccacaagcatgaccctgcacttccacgcctggccat ccaattgctcaaacgactggctacggttgctcccatgtctgtttatgcctgccttggtag tgatgctgctgccatccgtgatgccttcctcacccgcctgcagagcaagattgaggacat gcgtattaaggtcatgatactggagttcctcacagttgcggtggagacacaacctgggct cattgagctgttcctgaacttggaagtgaaagacggcagcgacgggtcaaaggaattcag cttaggggagtggagttgcctccaagtagtcttagagctgatagactccaaacaacagga gaggtactggtgccctcccctcttgcatcgtgctgccattgccttcctgcatgctctgtg gcaggaccgtcgagacagcgccatgctagttctaaggacaaagccaaagttctgggaaaa tttaaccaatcccctctttgggacccttcctccgccttcagaatcgtcagagctcagtgt cttggatacctgtgccttaatcatgaaaatcatctgtttggagatctactatgttgtcaa gggctcactggatcagtccctgaaagacacgctgaagaatttctccaccaaaaagcgctt tgcctattggtcagaatatgtgaagttactggcatatcatgtggcagagacagagggtag cagctgtgcctccatgacagaatatcaaatgctgatctcagcctggcggatgctgctgat aatctctactagccatgcagatataatgcacctgactgattctgcagttcatcagcaatt gtttctggatgtgctaaatgggaccaaggttttgcttctagttcccatgtcagtatcctg tctgcagctggggtctatgctatgtacccttcttctgatcctgctcaaacagtggaagag cgagttgggttctgtggataaaatcataaactccttgacgcagattctggagggagtact acaggcagatcagcagatgatggagaaaaccaaagccaaagtgttctcagctcttatcac tgtgctgcaaatgaaggagatgaaagtgaatgagatcccacagtactcccagctggtgtt gagcgtgtgtgaaacactccaagatgaggtaattgcactctttgatcagactcgacacag cctgaccttgggagatgctacagatgacaaggacagcatggaaacagatgatgcctcccg agttaaacacaaggaccagcgagatggggtgtgtgttttgggtctgcatctggctaaaga gctctgtgaagttgatgaagatggagactactggctacagattactaggaaagtccctgt gcttcctactatctttgccgcattggagatcagcttgagagttaaacaaaaccttcactt cacggaggcctcattacatttactgctgaccttagcaaggactcagcagggagcagcagc agtggctggagctggtgtcacacagagtgtctgcttgcccctcttgagtgtgtaccagct cagcactaatggagccatccagacatctgcttcttctcgaaagtctctggatgccccgtc ttggcctggagtctatcgtctctccatgtcactgatggaacgccttcttaaaacacttag atacaacttcctgacggaagcattagactttgttggtgtccatcaagagaggattcttca gtgcctgaatgcagtacggacagtacagagcttggcctgtctggaagaggctgatcacac tgttggcttcattcttcagctctcaaatttcacaaaggagtggcatttccacttgccaca gctaatgagggacatgcaggtgaacctgtgttatctgtgtcaggcctgtacctccctcct gcacagccgcaaaatgctccagcactacctgcagacaaaaaatggtgattcccttccatc aagtgtgactccacgagtgcagcgtaatcctcaggcctcctccaaacatcccagccctga gtcagaggcagcagagcagaaagcactgcttacagtgcagtacagcctcttgaaaatcct cagcaaatctcttgccgccctgcgccatttcacccctgatgtctgccagatcctccttga tcagtcactggaccttgctgagtacaacttgctctttgttttgagtttcaccacaccagc ctttgattcagatgtcgcaccttcctttgggaccctccttgccacagtcaacgtggccct taacatgttgggagagctggataagaagaaggaacctttccctcaggctgcagggctaaa tatgcaagagggaaccaaaaccctcaagtctctgctcatgtttacaatggaaaactgttt ctacctgctcatctcccaggctgttcggtacttgagagacccagccgtgcacccccgtga taagcagcggatgaaacaggagctcagctctgagctgagtacactgctctccagcctgtc tcgttacttccgccgtggtggtccttcttcacctgccagcggggttcttccctctcccca aggaaagtctgcttccaagctgggtcctgaggggcaggagcctttgtttcagcttgtgca ggcctttgtccggcacgtgcagagatag

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