Phalacrocorax carbo (great cormorant): 104052400
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Entry
104052400 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 12-like
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao02010
ABC transporters
pcao04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104052400
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104052400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcao02000
]
104052400
Transporters [BR:
pcao02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104052400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
DUF4162
AAA_23
AAA_15
CathepsinC_exc
Motif
Other DBs
NCBI-GeneID:
104052400
NCBI-ProteinID:
XP_009511958
LinkDB
All DBs
Position
Unknown
AA seq
2411 aa
AA seq
DB search
MLNETVLNSLSFSDILAGWNNLSTLFSLAQDELHMNDLLQRLQGAFSHTKWTYYSSIWDV
VDSFLNTKRNITEAAAFAKLLEAVANSSANDVSALEIIEASHYILKRLNFSDLLNEFNTS
SSSSFPSNKTSFDSVIDIVAHHFIVMAETLYNKTLPWTQSDQTLSPTSLIARFLFLEFEN
TILQVTVNNSYNPYLMCLINATEVEDSKLTENITMLLKQTHLKKNSFVQNNASKKHSSIP
ELLKLKISHLRDLTLLLCDYESFKSIQHICHLPNVSFGELCEQSQTHEQLLRAIELSNQV
VTNVLNHRRISQELQSVLIGDATNIQTQMKWFQENVPEVAFFQEMPQYMTTLNSMLNITE
NLTDSRKQEKLRDVFKNVDLLKEDLRNTTGMSTASIDALLEVSLPENSSQLISQILQLES
CRVRPADPQLLTVVEEFCNLSLSERTRETYFLGVTLLRHLDIYNFLYKMFFPKELQKSVD
NMLGLLTKMKYFRHEVESGVDPLLQAIHSLKKLRQSRNVPLTKALFKPNNFRITRGTFKS
VSKVLCNQEITPLFFESLLPDFGDPVSNSSSVEDVYVQKMMRKYGIPHDSTPFCLSFYLD
LVKTPTGALIWSFLKPMVLGKILYTPDTIETQAIMGKSNATLEQMADLALKSQEWLDKSP
VIMNSLAKLTQTVPMIKNTLQNPFVQVFIKLMVDLDAAELLSQINELDDIRLELQNNADI
VDQLNTLATLAVNVSSCVSFNRIQAVRNLEEMEMVAKELFLKNELFASIIFKLPSSNSSP
GHSVHGDLALPPVLNYTIRMSSRITQTTNRIRERIWTVGPHNSTSQSQIYSRAFIYLQDS
IERAIIELQTGKNPEEIAVQVQAMPYPCYNKDMFLTSVTYSLPFALMAAWVLFIADFVKT
LVQEKDLRLYEYMKMMGVNASSHFIAWFIECAIFLLITVTFLIIVLKVGDILPKTNTALL
FLYLMDYSLSIIAMSYFISVFFNNTNIAALVGSLVYILTFFPFIVLLVIENHLSFSVKSL
LSLLSPTAFSYASQYIARYEAQGIGLQWDNMYKSPMIGDNTSFGWMCWLILIDSVIYFIL
GWYIRNVFPGRYGMAAPWYFPLLPSYWVEYNSYLPFWNEKRRGFLFSRLMLRKEATLNNK
ICAPSPHLEPEPTDLTLGVSLRGITKVYGSKAAVDNLSLNFYEGNITSLLGHNGAGKTTT
ISILTGLFPTSSGTIIVYGKDIRTDQEVIRKNMGVCMQHNVLFNYLTTKEHLLLYGYIKV
PHWSKQDLYQEVKRTLKETGLYSHRHKLAGSLSGGMKRKLSIAIALLGGSRVVILDEPTT
GVDPCSRRSIWEIISKNKKGRTIILSTHHLDEAEVLSDRIAFLEHGGLKCCGSPFYLKET
FGDGYHLTLTKKKNMIEECDTTAVTSLIQSYLPEAYLKEDIGGELVYVLPPFRSTVSGAY
QALLRALDTSLSDLHLGCYGISNTTVEEVFLNLTKELVKDQQEDAELPQQLPGASGQIGS
DEMSMSTDTFTERDDQLLIRSKSLQGLPLLLKKTSALFIKRFHHSRRDVRGFIAQVILPV
LFVMAAMGLGTLRTKETEYPELSLSPSLYGTSDQADFFGNFNETTDALVASMLAFPGTDN
TCMNESNSQCLKEDMLGQWIFSGNQRTKYSTCNCTDGIQTCPQTNYTPPHRRTFSTRTLY
NLTGHNVETYILATTKDFLQKRYGGWSFGLPLTTDLQFDIRPVPPNRTLTKVWYNPEGYH
SLPAYLNSLNNFILRANLPKNETSRYGIFLSAHPYPGGQSQEQVMLNSLLDIIVSMSVLV
GYSITTASFVLYVVKEHQTKAKQLQHISGIGMTSYWVTNFVYDLVLFMVPVGLSIGVISS
FQIPAFCNNNNLLAVFLLLLLFGYATFSWMYLLAGFFKETGMAFIVYVCVNLFFGINTII
THSVVFLLSQEKATDQGLHDLAENLRHVFLLFPQFCFGYGLIELSQDQALLGFLKAYGVD
YPDKTFELDKTTSKLFAMFIQGTVFFAIRLTVHDRMIQRVWNNILEFLFDRVHGKASLLP
PVAEEDGDVQAERNRVESGKADFDVVQLQNLTKIYHLPHKRIVAVKNISLXPAGECFGLL
GVNGAGKTTIFKMLTGDIGASSGRLRVQDHSGSLNDINEAHWSLFGYCPQEDALDDLLTV
EEHMYYYARLHGIPEREIKGIVLQLLHRLNLMAYKDRVTSMCSYGTNRKLSTALALVGNP
SILLLDEPSSGMDPNAKRHLWKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGSFQ
CIGSLQHIKSRFGRGFTVKMHLNSNTVNTEMLTEFMKSHFPNTCLKDRHFNMVEYHVPVS
AGGVANIFDLLEASKAAFDIRHFSVSQTTLEEVFINFAKDQVDPDGADAGPDVTGDSSDT
SSQDSTISSVY
NT seq
7236 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgaaacagtactgaactccctgagtttctctgacatcttagcagggtggaat
aacctgtccacgctcttcagtttggcacaggatgagctccacatgaatgacctgctgcag
agactccaaggcgccttcagccacaccaaatggacgtattactcaagcatctgggatgtg
gttgacagtttcctaaacaccaaaaggaatataactgaagcagctgcctttgcaaagttg
ttggaagcagtggcaaacagttctgccaatgatgtgtcagctctagaaatcattgaagcc
agtcactacattcttaagaggctaaacttctctgatctgctaaatgaattcaatacaagt
tccagttcatcttttccctccaacaaaactagttttgacagtgtgattgatattgttgct
catcacttcattgtcatggcagaaacgctgtacaacaagacactgccttggactcagagt
gaccaaactctgtcaccaactagtctgatcgcacgatttctgtttttagaatttgaaaac
accatcttacaggtgacagtgaataacagctataacccttacctgatgtgtctaataaat
gccactgaagttgaagacagcaaattgacagaaaacatcacaatgcttttgaagcaaact
catctgaaaaagaactcttttgtgcaaaataacgcctccaagaaacattcatccatacca
gagctcctgaagctaaaaatatctcacctccgggatctgacattacttctttgtgactat
gagagctttaagtcaatacagcatatttgccatcttcctaatgttagctttggagaactg
tgcgaacaaagtcaaactcatgagcagctcctccgcgctattgaactgagcaatcaagtt
gtgaccaatgtactgaatcacagaagaatctcacaagagcttcagagtgtactgattggg
gatgccacaaacatccagacacaaatgaagtggtttcaagaaaatgtaccagaagttgct
ttctttcaagagatgcctcagtatatgactactttgaattccatgctgaacatcacggag
aatttaacggattctaggaagcaagaaaagttaagagatgtgtttaaaaatgtggacctg
ctcaaagaggatctcagaaacacaacaggaatgtccacagccagtattgatgctcttctg
gaagtatctctcccggaaaacagcagtcagctcatttctcagatcctccagctggagtct
tgtcgcgtccgtcctgctgacccacagctgctaacagtagtggaggagttctgcaatctc
tctctttcagagaggactcgtgagacgtacttcctaggggtcacgctgttaagacactta
gacatttataatttcttatacaagatgtttttcccaaaggaacttcagaaatccgtggac
aacatgttaggccttctgacaaaaatgaaatatttcagacacgaggttgaatctggcgtt
gatccattgctacaagctattcattcactgaaaaagctacggcagtctagaaatgtgcca
ctgactaaggcgttatttaaaccaaacaacttcaggataacacgtggcacatttaagtct
gtgtcaaaagtcctctgcaaccaggagatcacacccctgttttttgagtccttgcttcca
gattttggagaccctgtaagcaacagttcttctgtggaggatgtctatgtccaaaaaatg
atgaggaaatatgggattcctcatgactccacaccattttgcttatccttttacctggac
ctggtcaagaccccaactggagctttaatttggtcttttttaaaaccaatggtgcttggg
aagatcctttatacaccagataccatagaaactcaagcaatcatgggaaagtctaatgca
acgctggagcagatggctgatctagccctgaagtcccaggagtggttggacaagtcccct
gtcatcatgaattcactggcgaagttaacccagacggtaccgatgatcaagaacaccctg
cagaatccctttgtgcaggtttttatcaagctgatggtggatttggatgcagctgaactg
ctgagtcaaataaatgaactggatgatattcggctggaattacagaacaacgctgacatt
gtcgatcagctgaatacgttagctacccttgctgtaaatgtgtcctcctgtgtctcattt
aatcgcattcaagcagtcagaaacttagaggaaatggaaatggtggctaaagagctcttt
ctgaagaatgagcttttcgcaagtatcattttcaagctgccttcaagcaatagcagcccc
ggacactcagttcatggggacttggccctccctcctgtgctcaactacaccatccgaatg
agcagcaggatcacgcaaaccaccaacagaataagggagcgcatctggacagtgggcccg
cacaattccacctcgcagagccagatttacagccgggcatttatttatctccaggatagc
attgaaagagctattattgagttacagactggcaagaatccagaggaaatagctgttcaa
gtccaggccatgccttacccctgctacaataaggatatgttcttaaccagcgtgacctac
tctcttccatttgctctgatggctgcctgggtgctgtttatagctgattttgttaaaaca
cttgttcaagagaaagatctgaggctttatgagtacatgaaaatgatgggagttaatgcc
agcagccatttcatcgcctggttcatagagtgcgctatcttccttctaataactgtcacc
ttcctcattattgttctaaaagtgggtgacatccttcccaaaacaaacacagctctcctg
ttcctgtatcttatggactacagcctgtccatcatagccatgagctacttcatcagtgtt
ttcttcaataacaccaacatagcagccttggtgggcagtctcgtgtacatcctcaccttc
ttccccttcatcgtgttgcttgtcatcgagaatcatttgagcttctctgtgaagagccta
ctgagtctgttgtctccaactgcgttcagttacgcaagccaatacattgctcgatatgag
gcacagggcataggtctgcagtgggacaacatgtataagtccccaatgattggagacaac
acttcctttggctggatgtgctggctgattctgatagactctgtcatttacttcatcctg
ggatggtatataaggaatgttttcccaggtagatatggcatggctgctccctggtatttc
ccgttgcttccatcttactgggttgaatacaacagttatctccccttttggaatgagaaa
cgaagaggctttctcttctccaggctgatgttaaggaaagaagccaccctcaacaataag
atatgtgcaccctctcctcacctggaaccggagcccactgatctgaccttgggagtctcc
ctccgtggcataacaaaggtttatggatccaaagctgcagtggacaacctcagcctcaac
ttctatgaagggaatatcacttccctgctgggacacaacggagccgggaaaactacgacc
atatctattttgactgggttgttccctacctcatcaggtactatcattgtgtatggcaaa
gatatcaggactgaccaggaagttatcaggaagaacatgggggtgtgtatgcagcacaat
gtgctctttaactacctcaccacaaaggaacacctgctgctctatgggtacatcaaagtc
cctcactggagtaaacaggacctctaccaagaagtgaaaaggactttgaaggagactgga
ctatacagccatcgtcacaagctagctggctccctgtctggggggatgaagaggaagtta
tctatagctattgctctcctgggtggatcaagggtggtaatactagatgaaccaaccaca
ggagtggatccatgctctcggagaagtatttgggaaattatctccaagaacaaaaaaggc
agaaccatcattctctcaacacatcacttggatgaagcagaagttctgagtgaccgaatt
gccttcctagagcatggagggctcaaatgttgtggttcgcctttctaccttaaggaaaca
tttggtgatggataccaccttacactcacaaaaaagaagaacatgatagaggagtgtgac
accacagcagtgacctccttgatccagtcctacctcccagaggcttatctcaaggaggat
attggtggagaactcgtatacgtgcttccccccttcaggtccacagtctcaggggcctac
caggcgcttctcagagccctcgataccagcttaagtgatctccaccttggctgctacggg
atttcaaacacaaccgtggaagaggtgtttctcaatctgacaaaagagctagtgaaggac
cagcaagaagatgctgaactgccccaacagctgcctggagccagtggtcaaattggcagt
gatgagatgtctatgagcacggataccttcacagaaagagatgatcagctcctgatcaga
tcaaaaagcctgcagggtttgccattgctacttaagaagacatcagctttgtttattaag
agattccaccatagccggcgggatgtcagaggcttcattgctcaggtcatcctcccggtc
ctctttgtgatggctgcaatgggacttgggacgctgagaactaaggagaccgaataccct
gaactgagtctttccccgtctctgtacggcacatccgaccaggcagatttctttgggaat
tttaatgaaacaactgatgctttagttgcttcaatgcttgctttccctggaacggataac
acatgcatgaatgaaagcaattcgcagtgtttaaaggaggacatgcttggccagtggatt
ttcagtggaaaccagagaactaagtattctacctgcaactgcacagatggcatccagaca
tgtccacagacgaactacactcctcctcacaggaggaccttctccacacggacactttat
aaccttacagggcacaatgtggagacctacatactggcaactaccaaagacttcctgcaa
aaacggtatggtggctggagctttgggctgcctttgacaacagacctccagttcgatatc
aggccagtgccccccaacaggacattgactaaggtgtggtataatcccgaaggttatcac
agccttccagcctatctcaacagcttgaacaacttcattcttcgagctaacttgccaaaa
aatgagacttccagatatggtattttcttatcagctcacccatatcctggaggacagagt
caagaacaagtaatgctcaacagcttactcgacatcatagtttcaatgtcagttttggtt
ggctactctatcacaacagcaagctttgtgctctatgtggtaaaagaacatcaaaccaaa
gccaagcaactgcaacatatttcaggcattgggatgacaagctattgggtgactaacttc
gtttatgatctggtactttttatggtccctgttggactctcaataggagttatttcatcc
ttccagataccagctttctgcaacaacaataacttactggcagtatttcttctgctgtta
ctgtttggatacgcaacattttcatggatgtacctgctggctgggtttttcaaagaaaca
ggaatggccttcattgtttatgtgtgtgtcaacttgttctttggcatcaataccatcatt
actcactcggttgtatttctgctctcccaggaaaaggctacggaccagggcttgcatgat
cttgctgaaaacttaaggcatgtgttcctcctgttcccacaattttgctttggctatggc
ttgattgaactgtcacaggatcaggcactgctgggcttcttaaaagcctacggagtggac
taccctgacaaaacctttgagctggacaagaccacatccaagctgtttgccatgtttatc
cagggcaccgtgttttttgccattcgtcttacagttcacgacaggatgattcagagagtc
tggaacaacatactagagttcctgtttgaccgagtacatggcaaagcatcgcttctgccc
cctgtggctgaagaggacggggatgttcaggcagagcggaaccgggtggagtctggcaaa
gctgacttcgatgtggtgcagctccagaatctcacaaagatctaccaccttcctcacaaa
cggattgtggctgtgaaaaacatcagccttnngcctgctggagagtgctttggcttgctt
ggtgtgaatggagctggaaagacaaccatcttcaagatgttgacaggtgatatcggagca
tccagcggaaggttgcgggtccaggatcattctgggtccttgaatgacatcaatgaggca
cactggtcactctttggctactgccctcaagaagatgccttggatgacttgctgacggta
gaagagcacatgtattactatgctaggctccatggcatcccagagagagagatcaaagga
attgtactccagcttctccaccggctcaatctgatggcctacaaagacagagtcacctct
atgtgcagttatggcaccaacagaaaattgtcgacggctctggctcttgttgggaatcca
tcgattctgctgttggatgaaccaagctctggaatggatccaaatgctaaacgccaccta
tggaaaatcatcagtgaggaagtgcagaacaaatgctcagttatactcacatcccacagc
atggaagaatgcgaagccctctgtaccaggctggctattatggtgaacgggagttttcag
tgcattgggtctttgcagcatatcaaaagcaggtttggaagaggattcactgtgaagatg
cacttaaatagcaacacagttaacactgagatgctgacagagttcatgaagtcacacttt
ccaaatacatgcctgaaggatcggcatttcaacatggtagagtatcacgttccagtctct
gcaggaggggtagcaaatatatttgatctcctggaagccagcaaagcagcctttgatatc
aggcacttctcagtgagccaaacaacgttagaggaggttttcatcaactttgctaaagat
caagtggatcctgatggtgcagatgcaggtcctgatgtgactggggacagctctgacaca
agcagccaagatagcaccatcagctccgtctattga
DBGET
integrated database retrieval system
