KEGG   Phalacrocorax carbo (great cormorant): 104052568
Entry
104052568         CDS       T08596                                 
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
pcao  Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:pcao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcao03036]
    104052568 (WDHD1)
Chromosome and associated proteins [BR:pcao03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    104052568 (WDHD1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Ctf4_C WD40 HMG_WDHD1 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd EIF3I WDR55 Beta-prop_Vps41 WD40_Gbeta Beta-prop_IFT140_1st HMG_box Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_EML eIF2A Beta-prop_HPS5 Beta-prop_WDR36-Utp21_1st Tricorn_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_Nup120_160 NBCH_WD40 HMG_box_2 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 104052568
NCBI-ProteinID: XP_009512164
UniProt: A0A093PXQ9
LinkDB
Position
Unknown
AA seq 1124 aa
MPSARKPMRYGHTEGHTEVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAVSNNTVQIHTFPEGAPDGILTRFTMNANHVVFNSDGTKIAAGSSDFMVKV
VEVTDSSKQKTFRGHDAPVLSLSFDPRDVYLASSSCDGSVRVWKIADQTCTTSWPLLQKC
NDVINAKSICRLGWQPGSGKLLAIPVDKVVKLYRRESWDSQFNLSDTFITQPLNVVAWSP
CGQYLAAGSVDGGVVVWNVETQECIERMKHEKNYSICGLAWHPKYRQIAYTDTEGNLGLL
ENIGDGKKPNDKVASTVTKDYDDLFDGDDDDYLKGEMIEPQSSPKAGANDDDGGDDDLVP
TSGHLRMAMIDDDDNSVDIGMIKANSSLREREDDDDDDQTSGFPALPPPSTQQPFYDGPK
PTPKQKPFQSGSTPAHLMHRFMVWNSVGIIRCYNDEQDNAIDVEFHDTSVHHATHLPNSL
NHTMADLSTEAILLACESAEELASKLHCIHFSSWDANKEWTVDMPKDEDIEAVCLGQGWA
ACATSALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMIMYHRGTGFDGDQCLGVQLME
LGKKKKQILHGEPLSLTKKSYLTWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWIPVCNTR
EHCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILSFKLPYCQVTTEKGQM
EEQYWRSVVFHNHVDYLSKNGYEIDENTKNQSVKEQQELLMKLFALSCKLEREFRCVELA
DLMTQNVVNLAIKYASRSRRLNLAQRLSEMAVEKASELAMAMEDEEEEEDFRKHLSAGYS
NSATEWRRPPVRNVQQNQEMEDAEETDAYEEVEETPEVQNQRPNPFSKGATSAEVTTPKS
VLIASSSQGRVNPFKVSSNKKDPVVPSANVLDTMSKYSKKTSLSSSRAVNKQNPPVIKPL
IPKPKSKQALAASFFQVRTPNSSEKTVEEREEKAGNESHEVKATAPENTENKRPKTGFQM
WLEENRANILMDNPDLNEAEVIKEGMSRFRMLSSEDRMVWTEKAKGGTVNDLTEDKKRKH
PTADEDEAKKNHEQKSEDSSLSKKPKPLDQSTNVRLSAFAFKQS
NT seq 3375 nt   +upstreamnt  +downstreamnt
atgccatccgcacgaaagccgatgcggtacggccacaccgagggccacacggaggtctgc
ttcgatgacaccgggagctgcattgtaacttgtggcagtgatggagatgttaggatttgg
gaaaacctggatgatgatgatccgaagtccattaatgtgggagaaaaggcctattcatgc
gctctgaagaatggaagactgatcacagcagtatcaaacaatactgttcagatacataca
tttcctgaaggagctccagatggcatccttactcgtttcaccatgaacgcaaaccacgtt
gtctttaatagtgacggtaccaaaattgctgctggatctagtgactttatggtcaaagtt
gtggaggtgactgatagcagcaagcagaaaacattccgaggacacgatgcgcctgtttta
agcctgtcttttgaccccagggatgtttacctggcatcatcgagctgtgatggttctgtc
agagtgtggaaaatcgcagatcagacatgcacaacaagctggccgctgctgcagaaatgt
aatgatgtgataaatgctaaatcaatatgcaggcttggctggcaacctggcagcgggaag
ttgctggcaattcctgtagataaagttgttaaactctacaggagagagagttgggatagt
caattcaatctatccgatacattcatcacacagcccttgaatgttgtggcctggtctcct
tgtgggcagtatctggcagctggaagtgtggatggtggtgtagtggtgtggaatgtggaa
actcaggagtgcatagagaggatgaagcatgagaaaaattattcgatttgtggactggca
tggcaccccaaatataggcaaatcgcttatacagatactgaaggaaatctgggcttgttg
gaaaatatcggtgatggaaagaagccaaatgacaaggttgccagtacagtgacgaaagac
tacgacgatctctttgatggagatgacgacgactatttaaagggagagatgattgagcca
cagtcttctccaaaggctggagctaatgatgatgatggtggtgatgatgaccttgtgcca
acctcaggccatctgagaatggcaatgattgatgatgatgataactcagtagatattggg
atgataaaagctaattccagcctacgtgaaagggaagatgatgatgatgatgatcagact
agtggctttccagctttgccaccaccctctacacaacagcctttctatgatgggccaaag
ccaacccccaagcaaaagccgttccagtctggctccactcctgcacatctcatgcatcgt
ttcatggtatggaattccgttggtatcattcgttgttacaacgacgagcaagacaatgct
atagatgtagaatttcatgacacctctgtacatcatgcgacgcacctgccaaactctctg
aatcacacaatggctgacctctctactgaagctattttactagcctgtgagagtgcagag
gaacttgcaagcaagctccactgcattcattttagctcatgggatgcaaacaaggagtgg
acagtggatatgccaaaggatgaagacattgaggctgtctgtctaggtcaaggatgggct
gcttgtgccactagtgccttgctagtgcgtgtgtttacagtgggaggcgttcagaaagag
atcttcagtctcccgggtccagtggtgtctatggcaggacacggagagcagttgatgatt
atgtatcacagaggtactgggtttgacggggaccaatgccttggagtacagctgatggag
ctaggaaaaaagaaaaaacaaattttgcatggagagcctctttctcttacaaagaaatct
tacttgacttgggttggattctctgcagaaggtaccccttgttacgtggattctgaggga
attgtgcggatgttgaaccgaggacttgggaatacttggattccggtgtgtaacacgaga
gagcattgcaaaggaaaatctgatcattactgggtagttggcatccatgaaaatccccag
cagctcaggtgcattccttgtaaaggagcccgattccctcctacgctaccacggcctgct
gtagcaatattatcttttaaacttccttactgtcaagttacaacagaaaagggacagatg
gaggagcagtactggcgttctgttgtatttcacaaccatgtggattacttatcgaaaaat
ggctatgaaatcgatgaaaacactaaaaatcagtcagtgaaagaacagcaagaacttcta
atgaaactgtttgccctttcttgtaaactggagcgtgaatttcgttgtgtggaacttgct
gacctcatgacacaaaacgttgtgaatttagctatcaagtatgcttctcgctctcgaaga
ctaaatttagctcagcgacttagtgaaatggctgtagagaaagcaagtgagctggcaatg
gcaatggaagatgaagaggaggaagaggatttccgaaagcatttgagtgctggttacagc
aactctgccacggagtggaggcggccgccagtcagaaatgttcagcagaaccaagaaatg
gaagatgctgaggaaactgatgcctatgaggaagtagaagaaacaccagaagtgcaaaac
cagaggccaaatcctttctccaaaggtgccacttcagcagaggtgactactccaaagtct
gttctaattgcatcaagcagccaaggacgagtgaatccctttaaggtgtcatctaacaaa
aaggacccagtggtcccctcagcaaatgttctagacactatgagcaaatactcaaagaaa
acttctttgtctagcagtcgagctgtaaacaagcagaatcctcctgttataaagcctctg
attcccaaacccaagtccaagcaggccttagcagcctccttcttccaggttcgtacacct
aactccagcgaaaaaacagtggaagaaagagaagaaaaagcaggaaatgagtcccatgaa
gtcaaagccactgcacctgagaacactgaaaacaaaagaccaaagacaggattccagatg
tggctagaagagaacagagcaaacattttgatggataatcctgatctgaatgaagcagaa
gtaataaaagaaggcatgagtcgatttagaatgctgtcgtcagaagacagaatggtgtgg
actgagaaagcaaaaggaggaacagttaatgatttaacagaagataaaaagcgaaagcat
cccacagctgatgaagacgaagcgaaaaagaatcatgagcaaaaatcagaggactcaagt
ttatccaagaaaccaaagcctttagatcaatctacaaatgtcagactgtcagcttttgca
ttcaagcaaagctaa

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