Phalacrocorax carbo (great cormorant): 104052908
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Entry
104052908 CDS
T08596
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04517
IgSF CAM signaling
pcao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104052908 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104052908 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcao04812
]
104052908 (SPTBN1)
Cytoskeleton proteins [BR:
pcao04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104052908 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
104052908 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
104052908
NCBI-ProteinID:
XP_009512557
LinkDB
All DBs
Position
Unknown
AA seq
2154 aa
AA seq
DB search
MELQKSTSMPGPLSPGYAAQVQYNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLARVSC
RITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENM
GSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNV
NIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDP
EDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASD
LLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKM
RANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAM
RETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVAKELETENY
HDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLS
QDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRV
AHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDYGKDLTSV
VRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIKDIREQWANLEQLS
AIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHKDVAEEI
ASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRLRKQALQDTLALYK
MFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIAR
QLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYHLECNETKSWIRE
KTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAI
LSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNT
LTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNE
LHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQED
FMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNREAASELLMRLKD
NRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLEKI
EKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDANKAELFTQSCADLD
KWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQSQARALSQEGKST
DEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWVGERMPIATSTDH
GHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEAIQQRLADLQQLW
NLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKH
QILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAGLKDLAEERRGKL
DERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQER
VDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDA
KEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAY
AGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQI
EAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQ
LTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEK
LIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPTPEPSPKVAEDAD
SQQQWDGTKGEQVSQNGLPSDQESPRVSYRSQTYQNYKNFISRRTANDRSWSGL
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaaaaatcaaccagtatgcccggaccgttgtccccaggatacgcagctcag
gtgcagtataactataatcagttagaaggaagattcaagcagttacaagatgaacgtgag
gcagttcagaagaagactttcacaaagtgggttaattctcacttggcacgcgtatcatgc
agaatcacagatttgtacactgaccttcgcgatggaaggatgctcatcaaacttctggaa
gttctttcaggagagagacttcctaaaccaactaagggaaggatgcgcatccattgcctg
gagaatgttgataaagccctccagttcctgaaagagcaaagagtgcacctagaaaacatg
ggatctcatgatattgtggatgggaatcacaggctgacacttggccttatttggactatt
atcctgagattccagatccaagatatcagtgttgaaactgaggacaacaaggagaagaaa
tctgctaaagatgctttgctgttgtggtgccagatgaagacagctggttaccccaatgtc
aacattcacaacttcacaacaagctggagggacgggatggctttcaatgcactaattcat
aagcacaggcctgatctgattgattttgacaagctgaagaaatcaaatgcacactacaat
ctgcagaatgcttttaaccttgcagagcaacaccttggtcttactaagctcctggacccc
gaggatatcagtgttgatcatcctgatgaaaagtcaatcatcacctatgtggtgacatat
taccactacttctccaagatgaaagctttagcggttgaaggaaaacgtattggaaaggtg
cttgacaatgccattgaaacggagaaaatgattgaaaaatacgaatccctggcatccgac
cttcttgagtggattgagcaaaccattatcatcctcaacaatcgcaaatttgccaactca
ctagttggtgtgcaacagcagctacaggcattcaacacttatcgcacagtagagaaacca
cccaaatttacagaaaaaggaaacctagaagtgctgctttttaccatccaaagcaaaatg
agagccaacaatcagaaagtatacatgccaagggaaggcaaactcatctctgacattaac
aaggcctgggaaagactggaaaaagctgaacatgaaagagaactggcactgcgaaatgag
ctcatcagacaggagaaactggaacaacttgcacgcagatttgatcgcaaggcagctatg
agagaaacttggctgagtgaaaatcaacgtctcgtttctcaggataactttggcttcgac
cttccagcagtagaggccgcaaccaaaaagcatgaggccattgaaacagacattgcagca
tatgaggaacgagtccaggccgtggttgcggttgcgaaggagcttgagactgaaaactac
catgatatcaaacgcattactgcaagaaaggacaatgttatacgcctatgggaatacctc
ctggagctgctcagggcacggagacagcggctcgagatgaatcttggtctgcaaaagatt
ttccaggaaatgctgtacattatggactggatggatgagatgaaggtgcttctgctgtct
caagactatggcaaacatctgttaggagtcgaagacctgttgcagaaacatgctcttgtg
gaagctgacattgctattcaggctgagagagtgagaggggtcaatgcatctgctcagaag
ttcgccaccgatggagaaggttacaagccctgtgacccgcaggtgatcagggaccgtgtc
gctcacatggagttttgttaccaagagctttgccagctcgcagctgagcgtcgggcccgc
ttggaggagtcccgacgcctctggaaattcttctgggaaatggctgaagaagagggttgg
atcagggagaaagaacagatcctgtcatctgatgactacgggaaggacctaaccagtgtt
gtccgtctcttgagtaaacataaggcatttgaagatgaaatgagtggtcgtagtggccac
tttcagcaggcaataaaagaaggtgaagacatgattgcggaggagcattttgggtctgag
aaaatcagagaaagaattaaggatatccgggagcagtgggctaacttggaacagttatct
gccattaggaagaagcgtctggaggaagcctctctccttcaccagttccaggctgatgct
gatgatattgatgcatggatgttggacatcctcaaaattgtctccagcaatgatgttggc
cacgatgaatattccactcagtccttggtcaagaaacacaaagatgtggctgaagagatt
gcaagctaccggccaaccattgactcgcttcacgaacaagcaaaggctctaccacaggaa
cacgctggatctccagatgtgcaaggcaggttgtctggaatagaggaaagatacaaagag
gttgctgagctgactcggctgcgtaaacaggccttgcaggatacccttgctctttataag
atgttcagtgaggcagatgcttgtgagctttggattgacgaaaaggagaagtggctgaat
aatatgcagattccagagaagctggaggacctggaagtgatccagcacagatttgaaagc
ttagaaccagaaatgaacaatcaggcatcccgtgttgcagtagtgaatcaaattgcaaga
cagctaatgcacagtggccatccaagtgagaaggagatcaaagcacagcaagataaactc
aacacaagatggagccagttcagagaactggtagataggaagaaggatgctctgctctct
gctctgagtatccagaactaccatcttgagtgtaacgaaaccaaatcctggatcagggaa
aagaccaaagtgatcgaatccacacaagatctgggtaatgatctagctggagtgatggcc
ctgcagaggaagctgacaggcatggaacgtgacctggtagccattgaagccaagctaagc
gacctgcaaaaagaggcagaaaagttggagtcagagcatcccgaccaggcacaggctatc
ctttcacggctcgcagaaatcaacgatgtatgggaagaaatgaagaccaccctcaagaac
cgggaagagtctcttggagaggcaagcaaactgcagcagttcctgagagatctggatgac
ttccagtcttggctctccagaacgcagactgcaattgcatccgaagatatgccaaacaca
ctgacagaggctgagaagctgctcactcaacatgagaatattaagaatgagatcaacaat
tatgaggaagattatcagaaaatgagggacatgggtgagatggtgacacaagggcagact
gatgctcagtacatgttcttacgccagcgcctccaagctttggacactggatggaatgag
cttcacaaaatgtgggagaacaggcaaaatctcctttcccagtctcacgcctaccagctg
tttctcagagataccaagcaagcagaagcatttcttaataaccaggagtatgttttggca
cacacggaaatgcccactaccttggaaggagcagaagctgctattaaaaaacaggaggat
ttcatgaccacgatggatgccaatgaagaaaagatcaatgcagttgtagagactggcagg
aggctagttagtgatgggaacattaactctgataaaatccaggagaaagtggactctatt
gatgacagacataggaagaaccgtgaagcagccagtgaacttctgatgagactgaaagat
aacagggatcttcaaaagtttcttcaggactgtcaagagctttcactttggatcaatgaa
aagatgcttacagcccaggatatgtcctatgacgaggcaaggaacctgcacagcaaatgg
ctgaagcatcaggcatttatggcagaacttgcatccaacaaagaatggctggagaagatt
gaaaaggagggaatgcagctcattgcagagaaaccagagactgaagctgtagtgaaagaa
aagctgacaggtctccatcaaatgtgggaagagcttgaatccactacgcagaccaaggct
cagcgtctctttgatgcaaacaaggcggagctttttacccagagctgtgctgatttggat
aagtggctgaatggtttggagagtcaaattcagtcggatgactatggaaaagatctcacc
agtgtcaacatcctgttgaagaagcagcagatgctagagaatcaaatggatgttcgtaag
aaggagatagaggagctgcaaagccaggcaagggctttaagtcaagaagggaagagtacc
gatgaagtagatggcaaacgccttactgtagaaaagaaatttctggagttgttggaacca
ttgaatgaaagaaaggcaaacctgctggcctccaaagagatccaccagttcaaccgggat
gtggaagatgaaattttgtgggtcggagagaggatgcctatagctacgtctactgatcat
ggacacaacctccagactgtgcagctactaataaagaaaaatcagactcttcagaaagaa
atccagggacatcagcctcgtattgatgatatttttgagaggagtcaaaacattatcaca
gagagcagccctaatgctgaagcaattcagcagagacttgcagacttgcagcagctgtgg
aacctcctaattgaggagacagagaaacgccacaagcgcctagaggagtctcacagagca
cagcagtattactttgatgctgctgaggctgaggcctggatgagtgagcaggagctctac
atgatgtcagaagagaaagccaaggatgaacagagtgctgtgtccatgctgaagaaacac
cagattctggaacaagctgtagaagactatgctgaaactgtacaccagctttcaaagacc
agcagaactttggtggcagataatcacccagaaagtgaacgtatcagcatgcgccagtcc
aaagtggataagctgtacgcaggcctgaaggatctagctgaagagagacggggcaagctg
gatgagagacacaggctgttccagcttaaccgtgaggtggatgacctggagcaatggatt
gctgaaagggaggtggtggcaggatcccacgagctgggacaggattacgaacatgtaaca
atgctacaggagcgattcagagaatttgcccgagacactggaaacattggacaggagcgc
gttgatactgttaaccacatggcagatgaactcatcaactctggacattcagatgctgca
acaattgcagagtggaaggatggactcaatgaggcctgggctgatctcctggagctcatt
gacacgagaacacaaattctagcagcctcttatgaactgcacaaattttaccatgatgcc
aaggagatcttaggacgtattcaagacaaacataagaaactgcctgaagagcttggtaga
gaccaaaacacagtggaaacactacagagaatgcacacaacattcgagcatgatatccag
gcgctcggcacccaggtgagacagctgcaggaggatgctgcacgccttcaggctgcctat
gctggagacaaagctgatgacatccagaagagggaaaacgaggtgctggaagcatggaag
tcgctgctggatgcctgcgagggccgcagggttagactggtagatacaggagacaaattc
cgtttcttcagcatggttcgtgatctcatgctttggatggaagacgttatccgacagata
gaagcccaagaaaagccaagggatgtttcgtctgttgaactactaatgaacaatcaccag
ggtatcaaagcagaaatcgatgcccgaaatgacagctttactacctgcattgagcttggc
aaatctcttctggcaagaaaacactacgcatcagaggagatcaaggaaaagctgctgcaa
ctgacagaaaagagaaaagaaatgattgacaaatgggaagacagatgggagtggctgaga
ctgattctggaggtacaccagttttcaagagatgcaagtgtagctgaggcctggctgctg
ggacaggagccctacctatccagtcgtgaaataggtcaaagtgttgatgaagtggaaaaa
ttaattaagcggcatgaagcatttgaaaaatctgcagctacttgggatgagagatttgca
gcactggaaagactgactacgttggaactgctggaagtacgtcggcaacaggaggaagag
gagaggaagaggcagccgcccactccagagccaagccccaaggttgcggaggatgcagac
tcccagcagcaatgggatgggacaaaaggagagcaggtttcccaaaatggtttgccatca
gaccaggaatctccacgggttagttaccgctcccaaacctaccaaaactacaaaaacttt
attagcagacggacagccaatgaccgatcgtggtctggactgtga
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integrated database retrieval system
