Phalacrocorax carbo (great cormorant): 104052909
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Entry
104052909 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate glucuronyltransferase-like
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pcao01100
Metabolic pathways
Module
pcao_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104052909
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcao01003
]
104052909
Enzymes [BR:
pcao01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
104052909
Glycosyltransferases [BR:
pcao01003
]
Glycan extension
O-Glycan
104052909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
104052909
NCBI-ProteinID:
XP_009512558
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MSFLYRTRYIQTELGFHERLFVAVLTSKATLNTLAVAVNKTVAHHFPRLLYFTGLRSAKV
PHGMVLVAHGDERPIWLMYETMHYIHQHFGSDYDWFYIMQDDTYAQAEQVKALVMHLSIN
QDVYLGRAEEFIGGDEQARYCHGGFGYLISRSLLLKLHPHLDSCRNEILSVRPDEWLGRC
IIDFLGITCVSELQGQHYHTYELAKNTEPEKEEEEEFQAALSVHPVSDMTVPAXXXXXXX
XXXXXAYQEIQDLQIQIRNLTSLTPAGEAGLTWPVGINAPFLPKSRFEVINWDYFTEQHL
FSCPDGSPKCELSGASKADVSEIIESALEQLNSRYQPLLRFSKRQLLNGYRRFDPTRGME
YTLDLLLEAVTQKGHSHILAKRVSLVRPLSKVEIIPMPYVTEATRVQLVLPLTVQDLDFV
ANFLDMFAMNTLDTHDNALLTLLFIYHPYDAQRVSQVDVFAGVKAMVGELEKRYAEVKIP
WISVKTEVPSQVKLMDIVSKKHPVDTLFFLASVWTXNMEFLTRCRMNTISNWQVFFPVHF
QEFNPALVYRGEQTASSSTDFLRDGHFDRHSFAEACFYNSDYMTARTKLAADILDRDEVL
ESMEVFDVFLHYSGLHLFRAVEPGLVQKYALRSCNPRLSEELYHRCVLSNLEGLASRSHL
AMALFEQEQANST
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcctttacagaactcgctacatccagacagaattgggattccatgaaagactg
tttgtggctgtgctgacctctaaggctaccctgaatacgttggcagtggcagtgaacaag
acagtagcccatcacttcccacgcctgctgtacttcacagggttgcgcagtgccaaggtg
cctcatggcatggtgctggtggcccatggggatgaacgtcccatttggctcatgtacgag
accatgcactatatccatcagcattttggttctgactatgactggttctacatcatgcag
gatgacacctatgctcaggctgaacaggtcaaggctctggtgatgcacctaagtattaac
caagatgtctatctgggacgtgcagaggagtttattgggggagatgagcaggcccgctac
tgtcatggtggctttggctacctgatctcccgcagcctgctgcttaagctccatccacac
ctggacagctgtcgcaatgagatccttagtgtgcggccagatgagtggctgggacgttgc
atcattgatttccttggcatcacttgtgtttctgagctccagggccagcattatcacacc
tatgaattggctaaaaatactgagccagagaaggaggaagaagaggagtttcaagcagct
ctttctgtgcaccctgtttctgacatgactgtaccggctcnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnngagcctaccaggagatccaggacctccagattcagatcaggaacctg
acgtcattgacccctgcaggtgaggcaggcttgacgtggcctgtgggaattaatgccccg
tttcttccaaagtcgcgttttgaggtaataaactgggactacttcactgaacagcacctc
ttctcctgtcctgatggctcccccaagtgtgaactctctggagccagcaaagcagatgtc
agtgaaatcattgagtcagcacttgagcaacttaacagtcgctaccaacctctgctccgc
ttcagcaagcggcagttgctgaatggctatcggcgttttgaccccacacggggcatggaa
tatacactggacctactgctggaggcagtgacccaaaagggccacagtcacattctggcc
aaacgagtgagcttggtgcggcccttaagtaaggtggagattattcccatgccatatgtg
acagaggccacacgggtgcagctggtgcttcccttgacagtgcaggacctggattttgtg
gcaaacttcctggatatgtttgctatgaacacactggacacacatgataatgccttgctg
actttgcttttcatctaccatccctatgatgcccagcgtgtcagtcaggtggatgttttt
gctggagtcaaagccatggtaggagagctggagaaacgctatgcagaagttaaaatcccc
tggattagtgttaaaactgaggtgccatcacaagtgaaactcatggatatagtctcaaag
aagcaccccgtggacacactattcttcttggccagtgtctggacanngaacatggagttc
ctgacccgctgccgcatgaatactatcagcaactggcaggtctttttccccgtgcatttt
caagagttcaaccctgcgttggtgtaccgtggtgagcagactgcttcttccagcactgac
ttcctgagggatgggcattttgacagacattcctttgctgaggcctgcttttataattct
gactatatgacagcacgtaccaagctagcagctgatatcctagaccgagatgaggtgctg
gagagcatggaggtatttgacgtcttcctccactattctggtctgcacctatttagggct
gtggagccagggttagtgcagaaatatgcactgaggagctgcaatccccggcttagtgag
gagttataccaccgctgtgtgcttagtaacttggaaggacttgcatcccgctcacattta
gccatggccctctttgagcaggaacaggccaacagcacttga
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