Phalacrocorax carbo (great cormorant): 104053338
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Entry
104053338 CDS
T08596
Name
(RefSeq) HMG box transcription factor BBX-like
KO
K21643
HMG box transcription factor BBX
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104053338
Transcription factors [BR:
pcao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104053338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2028
Motif
Other DBs
NCBI-GeneID:
104053338
NCBI-ProteinID:
XP_009513065
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
ISSNTSQLSSPEPVKHCGKSALFQLAEISSNTSQLSSPEPVKHCGKSALFQLAEISSNTS
QLSSPEPVKHCGKSALFQLAEISSSTSHSGPSDLTKQCGTSALFQLAEMCLASEGVKVKE
PGKTKVEAAEDVGREVPEEMEVEELEKTTIKDSCKGKVEQSETEKTQNRDETKAEESETA
KCRDFTSLAMESSPFERSDNTKDHMCCSPELSMADMSILGLKPEKIKKKKKKNKLDRHTN
EKSTPKKPCKKRQSSESDIESVMYTIEAVAKGDWGAERLAETPRKKARPVSNVKGSVLDT
KSPKKKAKSKEKKTSKEKPMETTKESKPPDFLSIAASKEIPCEASDNIKVEPLTPTEEVV
PQSLPGQVKTEDSDCVKKIETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSG
KGNSSDHEGCWNEENWAFSQSGTSGNKKLKKPKPKEEFVFGLARLEEEFEKKFNSLPQYS
PITFDRKNSAVPRKKRKVGSGSSEQPKSNKGSFQSQKKNLFHKIVSKSKHRKEKLNVPDT
AILSEDRNSSESAWKNKISISALNTPEPAMMHEPLVGSQKRKARKTKITHLVRTADGRVS
PAGGTLEEKPKELPQSTLQKTSSAETDCNSECSRNAETEENHSIASDMPAVSAFFSLAAL
AEVAAMENVHRSQRATPLPHDGQPNEMSQAPVLISCADQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atctcatcaaatacttcccagttgtcaagtcctgagccagtaaagcactgtgggaagtca
gcactcttccagttggcagagatctcatcaaatacttcccagttgtcaagtcctgagcca
gtaaagcactgtgggaagtcagcactcttccagttggcagagatctcatcaaatacttcc
cagttgtcaagtcctgagccagtaaagcactgtgggaagtcagcactcttccagttggca
gagatttcttcaagtacatcccattcaggtccttctgatttaacaaaacagtgtggaaca
tcagcattatttcagctggcagagatgtgccttgcttcagaaggagtaaaagtgaaagaa
cctgggaaaacaaaagtggaagcagcggaagatgtgggaagggaagttccagaggaaatg
gaagtagaagaactggagaaaacaacaataaaggactcctgtaaaggaaaagtagaacaa
tcagagacagagaaaacgcaaaaccgggatgagacaaaagctgaggaatcagaaactgca
aaatgcagagattttactagtcttgcaatggagagcagtccttttgagagaagtgataac
acaaaggatcacatgtgctgttctccagagctttcaatggccgacatgagtatccttggg
ctaaagccagaaaagataaagaagaaaaagaaaaaaaataagttggaccggcacacaaat
gaaaaatccacccccaagaaaccttgtaaaaagaggcagtcctctgagtcggacattgaa
agtgtaatgtatacaattgaagctgttgcaaagggggactggggtgccgagagactcgca
gaaactccccgcaaaaaagcccggcctgtctcaaatgtgaagggaagcgtgttggataca
aaatcaccaaagaaaaaagcgaaatcgaaagagaagaaaacatcaaaggagaaacccatg
gagaccaccaaagaatcaaagcctcctgatttccttagtattgcagccagcaaggaaata
ccctgtgaggcttctgataacattaaagtggaaccactgaccccaacggaggaggtggta
ccccaaagcttaccaggacaggtcaaaactgaggacagtgactgtgttaaaaagatagaa
acctgtggctccaggaaatcggagagatcttgcaaaggtgctctttataaaactctggtg
tcagagggcatgctcacatctctgcgcgctaatgtggacagaggaaaaagaagctcaggg
aaaggcaactcctcagatcatgaaggatgctggaatgaagaaaactgggctttttcccag
agtgggacaagtgggaacaaaaaactgaaaaagcctaagccaaaggaggagtttgttttc
ggcttagcaaggttggaagaagaatttgaaaagaaattcaacagcctccctcaatacagt
cctattacctttgacaggaaaaattcagctgttccaaggaaaaagagaaaggttggaagc
ggctcatctgaacaaccaaaatccaacaaaggttcattccagtctcagaaaaagaactta
ttccacaaaattgtcagcaaatctaagcacaggaaggagaagcttaatgttccggacaca
gccatactctcagaagacagaaattccagtgagtctgcctggaagaataaaatttctata
tctgccctaaacactccagagccagcaatgatgcatgagcctttagttggcagccagaag
aggaaagcaaggaaaactaagatcacacatcttgttcgaacagcagatggtcgagtgtca
ccagcaggagggacactagaggagaagccaaaagagctgccacaaagtactcttcaaaaa
acatcaagtgcagaaacagattgcaacagtgaatgctccagaaatgcagagacagaagaa
aatcatagtattgcatcagatatgccagcggtgtctgcattttttagcttagctgctctg
gcagaagtagcagccatggaaaacgtacacagaagtcagagggccacacctctcccacat
gatggacagccaaatgaaatgtctcaggctccagtgcttatttcctgcgctgaccagtga
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