Phalacrocorax carbo (great cormorant): 104053399
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Entry
104053399 CDS
T08596
Symbol
TBC1D4
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 4
KO
K17902
TBC1 domain family member 4
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104053399 (TBC1D4)
Membrane trafficking [BR:
pcao04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104053399 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104053399 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
104053399 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
Anillin_N
Motif
Other DBs
NCBI-GeneID:
104053399
NCBI-ProteinID:
XP_009513130
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MPVLLNWRPDQKVPEVISSIRQVSKAALKEDAKPSKDSEDAFYDSQKFEVLYCGRVTVAH
KKAPSTLIDDCIEKFSLHERQRLKLLNEQRNNESSLDLPLCEENVPTSPSDSPFEELDSP
NNTAGHAVMFTVGSQTNLANLASTRGSFPERILEDSGFDEQQEFRSRCSSVTAVMQRRVH
DTNLKIQPRRRHASAPSHVQPSDSEKNRTMLFQVGRFEVNLISPDTKSVVLEKNFKDISS
CSQGIKHVDXXXXXXXXXTXGLSQYVCYVFQCASESLVDEVMLTLKQAFSTAAALQNAKT
QIKLCEACPMHSLHKLCERIEGLYPPRAKLVIQRHLSSLTDNEQADIFERVQKMKPDNDQ
EENELVILHLRQLCETKQKTHIHIGEAPSTVSNSAIPESATSGGRFKLDILKNKAKKSLT
SSLENIFSRGANRMRGRLGSVDSFERCNSLASDKDTSPGDTPPATPPASPVSSAWQPFPE
EDAASPQFRRRAHTFSHPPSSARRRITFQNGRSQSVRSPLLRQSCVEVTSPAVGVRRALS
ESESASPGLPSSVSAPSFLKSFYQGSGRPLQHSESDLSRSEGEGKKRTSTVCSSESLNAV
GATLTPRRISWRWRIFLQVASPMNKSPSKMQHPDGHDGSELLPLSPLAPPLEEDPLVLVL
QNEDGPDKTGERKNSEELQSLWRKAIHQQILLLRMEKENQKLEEASRDELQSRKVKLDYE
EVGTCQKDAIHVWDKKLLNCRAKIRCDMEDIHSTLKEGVPKSRRGEIWQFLAVQYRVRHR
LPNKQQPPDISYKELLKQLTAQQHAILVDLGTSIXXHPYFSAHLGAGQLSLFNLLKAYSL
LDKEVGYCQGISFVAGVLLLHTSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQVQMYQLSR
LLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFPLGFVARVFDIIFLQGTEVIFKVA
LSLLSSQETSIMGCESFENIVNFLKTTIPDMTQPQMEKIITQVFEMDISKQLHAYEVEYH
VLQDELQENVNPCDEGEPLEKLGRANSHLKRQNMDLLEKLQVAHAKIQSLESSLETVLTR
ENKMKTVIQSLEQEKITYQKTLEQIMKYLPAEALSDCEQLLKEVNYNPNNKIK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttcttctgaactggagaccagaccagaaggttcctgaggtcatcagcagcata
agacaagtctccaaagcagcactgaaagaagatgccaaaccaagtaaggatagtgaagat
gccttctatgactctcaaaaatttgaggtcttgtattgtggaagggtgacggtggctcac
aagaaagctccctccacactaattgatgattgcattgagaaattcagccttcatgagcgc
cagcgcctgaaactactaaatgagcagcggaataatgagtcaagtttggacttacccctg
tgtgaagaaaatgtgccaacttctccatcggatagcccatttgaggagctggacagccca
aataacaccgcagggcacgctgtgatgtttacagtcggcagccagaccaacttggccaac
ctggccagcactcgtggttcctttccagagagaattttagaggactcgggctttgacgag
cagcaagagtttcgctcccggtgcagcagtgtcactgcagttatgcaaagaagggttcat
gacacaaacctgaaaatacagccacgcagaagacatgcaagtgcacccagtcatgttcag
ccctccgattctgagaagaacaggacaatgttgttccaggttggaaggtttgaagttaac
ctcatcagtccagacaccaaatctgttgtgcttgaaaagaattttaaagatatctcttca
tgttctcagggtataaaacatgttgatnnnnnnnnnnnnnnnnnnnnnnnnnnaaccnnt
gggttaagccagtatgtttgctatgtgttccagtgtgcaagtgaatctctggttgatgag
gtaatgcttaccctgaaacaagcctttagcactgctgcagctctgcaaaatgccaagaca
cagattaaactgtgtgaggcctgccctatgcattcattgcacaaactttgtgaaagaatt
gaaggactctatccaccaagagccaaacttgtaattcaaagacatctgtcatcactaact
gataacgagcaagcggacatttttgaacgtgttcagaaaatgaagcctgacaatgaccag
gaagaaaatgaacttgtgatcttacatctacgccagctctgtgaaactaagcagaagacg
cacattcacattggtgaagcaccatcgaccgtttcaaacagtgcgattccagaaagcgct
accagtggtggcaggtttaaacttgacattctgaaaaacaaggccaagaaatccttgact
agctctctggaaaatatcttctcaaggggagccaacagaatgcgaggtcgcctgggaagt
gtggacagctttgagcgctgcaacagccttgcttctgacaaagacacttcgccaggcgat
accccgccagctactcctccggcatcccccgtgtcctcggcctggcagccatttcctgag
gaagacgcggcctccccccagttcaggaggcgtgcgcacaccttcagccaccccccctcc
agtgccaggcggaggataaccttccagaacgggaggtcccagagcgtccggtccccgctg
ctgcggcagagctgtgttgaggtgacaagccctgctgttggggttcggcgtgctctcagt
gagagtgaatctgcatcacctggtctcccctcctctgtctctgccccttctttcctgaaa
agcttttaccagggctcaggaaggccactccagcactcagaaagtgacctctccaggagt
gaaggggagggaaagaaaagaacatcaaccgtctgcagcagcgaatctctaaatgctgtg
ggggccacacttacacctcgccgcatctcctggcggtggagaatattcctgcaggtagct
tcacctatgaataaatctccttccaagatgcagcatccagatggtcatgatggaagtgaa
ctgttaccattatcgcctcttgctccacccttggaggaggaccctcttgttctagtattg
caaaatgaggatggtccagataaaactggagagaggaaaaactcagaagaactacaaagt
ctgtggagaaaagccatccatcaacaaattctgttacttcgaatggaaaaagaaaaccag
aagctggaagaagcaagcagagatgagctccaatcaagaaaagtcaaactggactatgag
gaagttggtacatgtcagaaagatgccatacatgtttgggataagaagctactaaactgc
agagccaaaatccgatgtgacatggaagatattcattccactttgaaagaaggtgtacca
aaaagtcgtcggggagaaatctggcagtttttggctgtgcaatatcgagtcagacacaga
ctgccaaacaagcagcagcctcctgacatctcttacaaagaacttctgaaacaactgact
gctcaacagcatgccatccttgtagatctaggtacgtctattnnnnnacatccttacttt
tctgcccacctgggagcaggacagctatcactctttaatctcctgaaagcatactctttg
ctggacaaagaagtgggttattgtcaaggtataagctttgtagctggagtgctgcttcta
catacgagtgaggaacaggcctttgaaatgctgaaattcctcatgtatgaccttggcttt
cgtaaacagtacaggccggacatgatgtcactacaggttcagatgtatcagctctcaagg
cttcttcatgattatcacagagacctgtataatcatcttgaagaaaatgaaatcagtccc
agtctttatgctgcaccgtggtttcttacactgttcgcatctcagtttccattaggattt
gtagccagagtatttgatattatttttcttcaaggaacggaagtcatatttaaagtagca
ctgagcctacttagtagtcaagaaacatctataatgggatgtgagagttttgagaacatt
gtcaattttcttaaaaccactattccagatatgactcagcctcaaatggaaaaaattatt
acccaggtgtttgagatggatatttcaaaacagctccatgcctatgaagtagagtaccat
gttcttcaggatgaactgcaggaaaatgtgaatccctgtgacgaaggtgaacccctggag
aagctggggagggcaaacagtcatctaaagagacaaaacatggatttgttggagaagcta
caggttgctcatgctaaaattcagagtctggaatccagcttggagactgttttgactcga
gagaacaaaatgaagactgtaattcagtccctggaacaggagaagataacatatcaaaag
actcttgagcagataatgaagtatttgccagcagaagcgttatctgactgtgaacagctc
ctgaaggaagtaaactacaatccaaataataaaataaaataa
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integrated database retrieval system
