Phalacrocorax carbo (great cormorant): 104053509
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Entry
104053509 CDS
T08596
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104053509 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcao03041
]
104053509 (PRPF38A)
Spliceosome [BR:
pcao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104053509 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104053509
NCBI-ProteinID:
XP_009513251
LinkDB
All DBs
Position
Unknown
AA seq
251 aa
AA seq
DB search
GGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYLE
PLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPRV
SALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPAVRYRRSRSRSPRR
RSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERSK
KSHKKSRRGNE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
ggcggcaacattaagcctacgcccttcttgtgcttgacgctgaagatgctgcagatccag
cccgaaaaggacatcatcgtggagttcataaaaaacgaggacttcaagtatgtccgaatg
cttggtgcattgtacatgagattgacaggcactgccattgactgctacaagtatcttgaa
ccactgtacaatgactatcgaaaaataaaaagtcagaacagaaacggggaatttgaactt
atgcacgtggatgaatttattgatgaactactccatgaggaacgtgtatgcgatatcatt
ctgcctcgattacagaaacggtatgttctggaagaagctgagcaactcgagcctcgtgtt
agtgctttggaagaagacatggatgatgtagaatctagtgaggaggaggaagaggaagat
gaaaagctggaacgagcaccatctcctgaccaccgcagaagaggctatagagaccttgat
aaacctcgcagatctccagctgtgcgatataggcggagccgaagcaggtctccaagaagg
cgaagccgctctccaaagagaagaagtccatcgccacgccgggagaggcatcgcagcaaa
agcccaagacgacaccggagcaggtccagggagaggcgccacagatcaagatctaaatct
ccaggacatcatcgtagtcacagacacagaagtcattccaaatcacctgaaagatctaag
aaaagtcacaagaagagtcggcgagggaatgaataa
DBGET
integrated database retrieval system
