Phalacrocorax carbo (great cormorant): 104053525
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Entry
104053525 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104053525
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104053525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
104053525
NCBI-ProteinID:
XP_009513267
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MQILEGELLLQALNGFVLVVTADALVFYVSSTIQDYLGFQQSDIIHQSVFELIHTEDRPE
FQRQLHWALNPAQSADSGPSVQGDNGFSQPATYYNPDQLPPENSSFMERNFICRLRCLLD
NSSGFLAMNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRT
KHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCAENHVRMMKTGESGMT
VFRLLTKENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNMKLPFMFAXX
XXXXXXXPMSSLMDPTQLKNKSTTGKGAKATLPNDSVDPNSLLGAMLRQDESVYLCPPAS
HKLSFERNFFADSRDELGGGGSSSWTDDLLPAGNHNILKRELMECSQDSTIPLPEDSAAL
FQDNKTSDLYSXXXXXXXXXXXXQDEEFFKTELSGMDDIGDIDITDEILTYVQDSLNKSD
FLYSGCNQQQPLVQNEGCLVQQELDPHQLHQHQNQLMEQQQQQQQQLCQKMKHMQVNGMF
TNWSSGTSMPLSCSQQQPQQYVFPGMHATTSEFSYKSEANSSPYACRQEFMPYKQPTGMM
PQLSNFAQMDFPVAGLDRSTYSASSNLEDFLSCLQQVPENHECGINSESVMLTPQTCYAG
AVSMYQCTQEAQPSCVDQMQYDPMMPSQQTLLNKFQNGFNGGNVNEAYPSQLDVISNAQT
ATHLQPLHHPTEPRSFSDLASSGFM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcctggaaggagagctcttattgcaggcattaaatggttttgtattagttgtt
acagccgatgctctggttttttacgtctcttctactatccaggactacttggggttccaa
caatctgatattatacaccagagtgtatttgaattgatccacacagaagacagacctgag
tttcaacgacagctacactgggcattaaatcctgcccagtctgcagattctggaccaagt
gtacaaggagataatggattttcacagccagcaacctattataacccagaccaacttcct
ccagagaattcttcctttatggaaaggaatttcatctgcaggttacgatgcctactggat
aattcatctgggttcctggctatgaattttcaaggacgattaaagtttctccatggacaa
aacaagaaagggaaggatggtgctactttgtctcctcagcttgctctgtttgcagtagct
actcccctgcagccaccatctatccttgagatacgaaccaaaaacttcatattcagaact
aaacacaaactggatttcacgcctactggctgtgatgcaaaaggaaagattgtcctgggg
tacactgaagcagagctctgtatgagaggaacaggataccagtttgttcatgcagctgat
atgctttattgtgctgaaaatcatgtccgaatgatgaagacaggtgagagtggaatgact
gtatttaggcttctaaccaaagaaaatcgatgggcctgggtacaggcaaatgcacgtctt
gtctacaaaaatggaagaccagattacatcattgccacgcaaagacctctcacagatgaa
gaaggggcagaacatctacggaagcgtaacatgaagttgcccttcatgttcgccannnnn
nnnnnnnnnnnnnnnnnnnnncctatgtcaagccttatggatcccactcagctgaagaat
aaaagcacgacggggaaaggagccaaagcaacgctaccaaatgattccgtggatccaaac
tccctcctaggtgccatgttaaggcaagatgagtctgtgtatctctgccctccagcatca
cataaactttcctttgagcggaacttctttgcagacagcagggatgagctgggtggtggt
ggtagcagcagctggacggatgatctcctacctgctggaaatcacaacattctcaaacgg
gagctaatggagtgttcccaggacagtactattccacttcctgaagacagtgcagcactc
ttccaagataacaaaaccagcgatttgtacagcnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnncaggatgaggagttttttaaaactgaattatctggtatggatgatattggg
gacatagacataactgatgaaatcttgacttacgttcaggattccttaaataagtctgac
ttcttatattcaggctgtaaccagcagcagcccctggtccagaatgaaggttgcttggta
cagcaagagttagatccacatcaacttcatcagcaccagaatcagctcatggagcagcag
cagcagcagcagcagcagctctgtcaaaagatgaaacacatgcaagtcaatgggatgttc
acaaattggagctctggcaccagcatgcctcttagctgctcacagcagcagccccagcaa
tatgtattccctggcatgcatgccactacatctgagttctcttacaaatcagaagcaaac
tcttccccttatgcatgtaggcaagagtttatgccttacaagcaacccaccggaatgatg
ccacagctttctaattttgctcaaatggatttccctgtagcaggtcttgacagatcaacc
tattctgcttcttccaacttggaggattttctcagttgtttgcagcaagtccctgaaaat
catgagtgtgggataaactctgagtcggttatgctaactcctcaaacatgctatgcagga
gctgtttctatgtaccagtgcacccaagaagcacagcccagctgcgtggatcaaatgcaa
tatgatcctatgatgccaagtcaacaaacgctgttgaacaagttccaaaatggtttcaat
ggaggaaatgtaaatgaagcatatccctctcagttagatgtgatcagtaatgcacagact
gccacacatcttcagcctcttcatcatccgacagaacccagatccttctcagatttggca
tctagtggatttatgtaa
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integrated database retrieval system
