Phalacrocorax carbo (great cormorant): 104053575
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Entry
104053575 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104053575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104053575
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104053575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
104053575
NCBI-ProteinID:
XP_009513326
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQENEPSYIGELGPPGRSSLDNVEM
AYARQIYIYNEKIVNGHLQPNLVDLCAAVAELGDKNISEMWAMVKQMTDVTLVPASDALK
VRTNMEVRMEFVRQALHYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPA
PVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKDKRL
SPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQVCF
DDDGASSPQDRLTLSQFQKQLLEDYGESHFAVNQQPFLYFQVLFLTAQFEAAIAFLFRTE
RLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEAGDPSGIRRLNFVRLLMLYTRKFESTD
PREALQYFYFLRNEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFAS
DTKPIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQIGTPHAXERLK
NMAHSIAERYKAQGISAKKSVDSTFYLLLDLITFFDEYHAGHIDRAFDIIEHLKLVPLSQ
DCVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQYKRMKGTSPAAPSRPQRVMEDRDSQ
LRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaatatcaccgagaatcaatgctggttgaatgggaacaggtgaaacaaagg
attcttcatactcttcttgcatcaggggaagatgctcttgatttcacacaggaaaatgag
cctagctacattggggagttgggccctccaggtcgcagctccttagacaacgtggagatg
gcatatgctcggcagatttatatttataacgagaagatagtgaatggacatctgcagcct
aacctggtggacctttgcgctgctgttgcagaactgggtgataagaacatctctgagatg
tgggccatggtgaaacaaatgactgatgttaccctggttcctgctagcgatgccttgaaa
gtccggacaaacatggaggtccgtatggaatttgtgaggcaggctttgcactacctagaa
caaagttacaaaaattacacctttgtgacagtctttggaaacctgcaccaggctcagctg
ggtggagtcccagggacctaccaactagtccgcagcttcttgaacatcaaactccctgcc
cctgtccctggtcttcaggatggtgaggtggagggccatcctgtctgggcactgatttac
tactgcatgcgctgtggagatttgactgcagccatgcatgtggtgaaacgggcacagcac
cagctgggagagtttaaaacctggttccaggaatacatgcacagtaaagataaaagactg
tctcctgccacagaaaataaactgcgtcttcattacaggcgagctctgagaaataatact
gacccgtacaaaagggctgtttattgtattattggccgttgtgacattacagataaccag
agtgaagttgctgataaaacagaagattatctttggctaaaactgaaccaagtgtgtttt
gatgatgatggcgcgagttctccacaagaccgactaacattatcacagttccagaagcag
ctgctagaagactatggtgaatcacattttgcagtgaaccagcagcctttcctctacttc
caagtattgttcttgacagcacagtttgaagctgcaattgcttttctcttccggacagag
cgtttgcgttgtcatgctgtccatgttgcgttggtcctgtttgagttaaaattgctcctg
aaatcttctgggcagagtgcacagctattaagccacgaagctggtgacccttctggcatc
aggcgtctaaattttgtgcggcttctgatgctttacacccgtaagtttgaatcaacggat
ccaagggaagctctgcagtacttttactttctcaggaatgagaaggacagccaaggagag
aatatgttcttgcgttgtgttagtgagctagtaattgaaagcagagagtttgatatgatt
cttggaaagctggaaaatgatggtagcaggaagcctggagtgatagacaagtttgcaagt
gacacaaaacccattattaacaaagtggcttctgcagcagaaaataaaggattgtttgaa
gaagctgcaaaactctatgaccttgcaaagaaccctgacaaagttctagaactgatgaac
aagctcctcagtcccgttgttccccagatcggtactccccacgcancagagcggttgaag
aacatggctcattccattgctgagaggtacaaagctcaggggataagtgcaaagaaatct
gttgactccacgttctaccttctgctagacttaatcacgttttttgatgaatatcacgcc
ggtcacattgacagggcctttgatattattgaacacctaaagcttgtacctcttagccaa
gattgcgtagaggagagagttgctgccttccggaatttcagtgatgaaatcaggcacaat
ttatctgaggtcctgcttgcaaccatgaatattttattcacccagtataagaggatgaaa
ggcacaagcccagccgctccttccagaccccagcgggtaatggaagacagagattcgcaa
cttcgatctcaagctcgtgcactgataacgtttgctgggatgatcccttacagaacatcg
ggagacacaaacgcaagactggtgcaaatggaggttcttatgaattag
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