Phalacrocorax carbo (great cormorant): 104053722 Help Entry 104053722         CDS       T08596                                  Symbol ATG4C Name (RefSeq) cysteine protease ATG4C   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04136   Autophagy - other pcao04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:pcao00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104053722 (ATG4C)    04136 Autophagy - other     104053722 (ATG4C)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:pcao01002]     104053722 (ATG4C)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pcao04131]     104053722 (ATG4C)    03029 Mitochondrial biogenesis [BR:pcao03029]     104053722 (ATG4C) Peptidases and inhibitors [BR:pcao01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    104053722 (ATG4C) Membrane trafficking [BR:pcao04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     104053722 (ATG4C) Mitochondrial biogenesis [BR:pcao03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     104053722 (ATG4C) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  104053722 NCBI-ProteinID:  XP_009513488 UniProt:  A0A093SXD6 LinkDB All DBs Position Unknown AA seq 459 aa AA seqDB search MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTDESGELST DGSNFDKINTEISGNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL AQGLMLHFLGRAWVWPDALDIDNSDSESWTAHTVKKLTASFEASLTAEREPKILSNHHQE ALKRNCDGSEMRNEVYHRKIISWFGDSPLAAFGLHQLIECGKKSGKIAGDWYGPAVVAHI LRKAVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSFMDSGKAVTKAVIILVPVRLGGE RTNMDYIEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF PLESFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVK GHSRDYDFASSALHEENDLFSEDEKKRLKRFSTEEFVLL NT seq 1380 nt NT seq  +upstreamnt  +downstreamnt atggaggccacagggacagatgaagtagaaaagataaaatcaaagtttatgtctgcatgg cacaacatgaaatacagttgggtgttgaaaacaaaaacttacttcagtagaaactctcca gtctttctgctgggaaaatgttaccacttcaaaactgatgaatctggtgaactctctaca gatgggtccaattttgataaaatcaacacggagatttcaggaaacgttgaggagtttcgt aaagattttatttctagaatatggctgacttacagagaggaatttcctcagataaagggg tctgcgttaacaacagactgtggttggggttgcacactgagaactggtcaaatgctgctg gctcaaggtcttatgcttcattttctcggtagagcctgggtctggccagatgcattggac attgacaattcggattctgaatcatggacagcccatacagtgaaaaagctgacagcgtca ttcgaagcatcgcttacagcagaaagagaacccaagatcctgtcaaatcatcatcaggaa gcattaaagagaaactgtgatggcagtgaaatgagaaatgaagtttatcatagaaaaata atttcttggtttggcgactctccgctggcagcttttggcttacatcagctaatagaatgt ggaaagaagtctggaaaaattgcgggagattggtatgggcctgcagtcgttgcacacatt ttaagaaaagctgttgaagaagcaagagaccctgagctacaaggagtaacagtctatgtt gctcaggattgtacagtctacagttcagatgttattgacagacagtgttcttttatggat tctggaaaagcagtcacaaaagctgtaattatattagttcctgtgagactcggtggagag agaacaaacatggactacatagagtttgtaaagggcattttaagccttgagtattgtgtt ggtattattggtggcaaacccaagcagtcgtattactttgctggatttcaagatgacagt ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc cctcttgagtcattccactgtccttctcccaaaaagatgtcattcaaaaaaatggatccg agctgcacaataggattttactgtagaactgttcaggactttgagaaggcttctgaagaa atcacgaagatgctgaaatcttcatctaaggagaaatatcccttgtttacttttgtaaag ggtcattctagagactatgactttgcttccagtgcactccatgaagaaaatgaccttttc tctgaggatgaaaagaaaagattaaaaagatttagtacagaggagtttgtcttgctttaa

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