Pseudoalteromonas carrageenovora: PC2016_0200
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Entry
PC2016_0200 CDS
T06565
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcar02000
]
PC2016_0200
Transporters [BR:
pcar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PC2016_0200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA_21
RsgA_GTPase
DEAD
AAA
AAA_5
AAA_30
AAA_16
AAA_23
nSTAND3
AAA_14
Zeta_toxin
AAA_15
AAA_18
DO-GTPase2
SRPRB
AAA_28
AAA_24
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QBJ70449
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Position
I:complement(214417..216195)
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AA seq
592 aa
AA seq
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MSKTTPKPEKAAFSSLLPIFAFIKPYKWMVVAALAALLVTAGVNLSLGQGVKFVIDHGFI
AGSQAQLQQAVLVLIGLISLLAVGTFSRFYLMSWIGERVSNDIRKAVFNRIVTLHPSYFE
ENRSGELMSRLTTDTTLLQSIIGSSFSMALRSALMLVGGLVMLLVTNLKLTLVVIACVPL
VLVPMMVFGKKVRKLASSSQDAIADISTYAGEIIQNIKVVQSYSHEAQEQHAFALETEKA
FSVAKSRIKQRSFLIAAVIFLTFSAISAMLWVGGSDVLAGTMTGGELGAFVFYAIMVAMS
VATVAEVYGELQRAAGAAARLLELLAVKSEIENPITSQDDKLLVNTNSPAIELENISFNY
PSRPDVSALNKISLTIEQGKTVAIVGPSGAGKTTLFELLQRFYDPANGAIKFNDVNIKDL
SLNTLRGKMGMVAQNPILFSSDVMHNIRYGNPNATDEQVYAAAKHAHADEFIKQLPQGYN
SFLGEQGVRLSGGQKQRIVLARAILKDPEILLLDEATSALDAQSEHHVQAALEHLMQNRT
TLIIAHRLATVKHADVIVVMKNGEIKATGSHQQLLVSSPLYQRLCELQFNKN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaacaacacctaagcccgaaaaagccgcctttagtagtttattacctattttt
gcgtttattaaaccgtataaatggatggtagtagcggcgcttgctgctcttttagtcaca
gcaggtgttaacttatcattagggcaaggcgttaaatttgtcatagatcatggctttatc
gcaggctcccaagcccagttacaacaagctgtattggtacttattggtttgattagctta
ttagccgtgggcacgtttagccgcttttatttaatgtcgtggattggcgaacgcgttagt
aacgatattcgcaaagcggtgtttaatcgcattgttaccttgcacccaagctactttgaa
gaaaaccgcagtggcgagcttatgtcgcgtttaacaaccgacaccactttattgcaatcg
attattggctcatcgttttctatggcactgcgcagtgcattaatgttagtgggtggctta
gtaatgctgttagttactaacttaaagcttacccttgtcgttattgcttgtgtgccgctg
gtattagtacccatgatggtatttggtaaaaaggtgcgaaaacttgcaagctctagccaa
gatgcaatagccgacataagcacctatgccggcgagatcattcaaaacattaaagtagta
caaagctatagccatgaagcgcaagagcagcacgcttttgcacttgaaaccgaaaaagcc
tttagtgtggccaaaagccgtattaagcaacgctcatttttaattgcagcggtcatattt
ttaacttttagcgctattagcgcaatgctttgggtaggcggtagtgacgtattggcaggt
actatgactggcggtgagctaggcgcctttgtgttttacgctattatggtggctatgtcg
gtggcaaccgttgcagaggtttacggcgagctgcaacgtgcagcaggtgctgcggcgcgc
ttactagagctacttgcagttaaaagcgaaatagaaaacccaatcacttcacaagacgat
aagctattagtaaacactaatagcccggctatcgaacttgaaaacattagctttaactac
ccatctcgccccgatgtaagcgcccttaacaaaataagcttaactatagagcaaggtaaa
accgttgccattgttggcccctctggcgcaggtaaaactacgttatttgaattactacag
cgcttttacgatccagcaaatggcgcgattaaatttaatgatgtaaacattaaagactta
tcgcttaataccctcagaggtaaaatgggcatggtggctcaaaaccctattttatttagt
tcagacgtaatgcataacattcgttacggcaacccaaatgccactgacgagcaagtatac
gccgctgcaaaacatgcccatgctgatgaatttattaaacaattaccgcaaggttataat
agctttttaggtgagcaaggggtaaggctatcgggtgggcaaaagcagcgaattgtactg
gcgcgcgctattttaaaagaccctgaaatactgcttttagatgaagcgaccagcgcactc
gatgcgcaaagtgagcatcatgtacaagcggcgcttgagcacttaatgcaaaatcgcacc
acgttaattattgcccataggctagcaacggttaagcatgcagatgtaattgtagtaatg
aaaaatggggaaataaaagcaacagggagccaccagcaattgctagtaagctcccctttg
tatcagcgtctttgtgaattgcagttcaacaaaaattaa
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