Pseudoalteromonas carrageenovora: PC2016_0302
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Entry
PC2016_0302 CDS
T06565
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar03030
DNA replication
pcar03410
Base excision repair
pcar03420
Nucleotide excision repair
pcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC2016_0302
03410 Base excision repair
PC2016_0302
03420 Nucleotide excision repair
PC2016_0302
03440 Homologous recombination
PC2016_0302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcar03032
]
PC2016_0302
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_0302
Enzymes [BR:
pcar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC2016_0302
DNA replication proteins [BR:
pcar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PC2016_0302
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PC2016_0302
NER (nucleotide excision repair)
GGR (global genome repair) factors
PC2016_0302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
QBJ70547
LinkDB
All DBs
Position
I:333627..336362
Genome browser
AA seq
911 aa
AA seq
DB search
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVINMLKSLIRQYDPSHMVV
VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEADDVIGT
FARIASEQKRHVLVSTGDKDMAQLVNEHVTLINTMTDSISDPQTVVEKFGVGPELIIDYL
ALMGDKVDNIPGVEGCGPKTAVKWLQKYGSLQGVMDNAGDIKGKIGEKLATALDHLPLSY
ELATIKCDVEVESDLDTFKLQEPNKDELIALYGECEFRRWLAELLDDPKTADTHIDVPTE
ANELPKVEDAHYETILTESQFDTLIEQLNSADLFAFDTETTSLDYMQAQLVGMSFSVKAG
EAAYLPVAHDYPGAPEQLSLEFVMQKLGPILADANKAKVGQNLKYDKSVLANAGYELNGI
KFDTMLESYVFNSVGTRHDMDSLALKYLGHKNISFEDIAGKGKKQLTFNQIELEQAAPYA
AEDADITLRLHEVLWPKLAADEKLKSVFEEIEMPLVNVISDIERTGVAIDSNMLAVHSQR
LGERLLELEKEAYEIAGEPFNLSSPKQLQVLLFEKLELPVIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLMVNEKTQRVHTSYHQAVTATGRLSSTDPNLQN
IPIRSEEGRRIREAFIAAEGYKIVAADYSQIELRIMAHLSQDKGLLNAFANGLDVHSATA
AEVFGVELDDVTTDMRRKAKAVNFGLIYGMSAFGLARQLDVPRHEAQHYIDKYFERFPGV
LEYMETTREKAAENGYVETIFGRRLHLPEINARNGARRKGAERAAINAPMQGTAADIIKK
AMLSVHSWVSEQAPNTIKLLMQVHDELVFEIKTDCAQAYTKQICELMSQAATLDVPLIVE
ADEGENWEQAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccccgaaaacccactaattttagttgatggctcttcatatttatttcgt
gcttatcattctccgccgcatttgactaattcaaaaggcgaggctaccggggctatttac
ggtgtgatcaacatgcttaaaagcctaatcagacaatatgatccgtcgcacatggtagtg
gtgtttgatgccaaaggtaaaacctttcgtaatgatatgtatagcgagtataaagctaac
cgcccgcctatgccggacgacttacgcacgcaaatagcaccaatacacagcattattaaa
gcaatgggttttccgcttattagcattgaaggtgttgaagccgatgatgtaattgggacc
tttgcacgcatagcatcagagcaaaaacgtcatgtactcgtttcaacgggtgataaagat
atggctcagcttgtaaatgagcatgtaacacttattaataccatgaccgacagtatttca
gacccacaaaccgtagtagaaaaattcggtgtaggccctgagctaattatcgattattta
gcattgatgggtgacaaggttgataacataccgggtgttgaaggatgcggtcctaaaaca
gctgttaagtggcttcaaaaatacggatcgcttcaaggtgtaatggataacgctggtgac
attaaaggtaaaattggtgaaaagttagcaacggcgcttgatcacctgcctttaagttat
gagcttgcaacaataaaatgtgatgttgaggttgaatctgatcttgatacctttaagctc
caagagccaaataaagatgagttaattgcattatatggtgaatgcgaatttcgtcgttgg
ttagcagaattattggatgatcctaaaaccgcagatacacatatagatgtgcctactgag
gcaaatgagctgccaaaagtagaagatgcacattacgaaactattttaaccgaatcacaa
tttgatacgcttattgagcagttaaatagtgctgatttatttgcgtttgataccgaaaca
accagccttgattatatgcaagcgcagttagtcggtatgagcttttcagtaaaagcgggt
gaagcagcttacttacctgttgcgcacgactacccaggagcacctgagcaattaagcctt
gagtttgtaatgcaaaaacttgggccaattttagctgatgcaaataaagccaaagtagga
caaaatcttaagtacgataaaagtgtgctggctaatgccggttatgaacttaacggtatt
aagtttgacactatgcttgagtcgtacgtatttaatagcgtaggcacacgccatgacatg
gattcattagcacttaaatacctaggccataaaaatattagctttgaagatattgctggc
aaaggtaaaaagcagcttacctttaaccaaattgagcttgaacaagccgcaccttatgct
gctgaagatgcggatataactctgcgtttacacgaagtgctgtggcctaaattagcggca
gatgaaaagctaaaatcggtatttgaagaaatagaaatgcctttggtaaatgttatttcg
gatatagaacgcacaggtgtagcaattgatagcaacatgcttgcagtgcacagccaacgc
ttaggtgaacgtttacttgaacttgaaaaagaagcatatgaaatagcgggcgaaccattt
aacttaagctcaccaaaacaattacaagttctattatttgaaaagcttgagctgccagtt
attaaaaaaacgcctaaaggtgcgccttcaacggctgaagaagtactgcaagagcttgcc
catgattatccattaccaaaagtaattattgaacatcgtggattatctaagcttaaatca
acgtataccgacaaattaccgttaatggtcaatgagaaaacgcaacgtgtgcatacgtct
tatcatcaagcggttacagcaacagggcgtttaagctcaaccgatcctaacttacaaaat
ataccaattcgctctgaagagggacgccgtattcgtgaagcctttatagccgcagaaggt
tataaaattgtagctgccgattacagccaaattgagctgcgtattatggcgcacttatcg
caagataaaggcctacttaatgcctttgcaaacggtttagatgttcacagtgcaactgct
gctgaagtatttggtgttgagcttgatgatgtaaccacagatatgcgccgtaaagctaaa
gcagtaaactttggtttaatttatggaatgtcagcctttggtttagcgcgtcagcttgat
gtgccacgtcacgaagcgcagcactatattgataaatactttgagcgtttccctggtgta
cttgaatacatggaaacaacccgcgaaaaagccgctgaaaatgggtatgtagaaactatt
tttggtcgtcgcctgcatttaccagaaatcaatgcgcgcaatggcgctcgacgcaaaggt
gctgaacgtgcagcaattaatgcaccaatgcaaggcacagcggcagacattattaaaaaa
gcaatgttaagtgtacatagctgggtaagcgagcaggcaccaaatacgattaagttactt
atgcaagttcacgatgaactggtatttgagattaaaacggattgtgcacaagcgtacaca
aaacaaatttgtgaactcatgtcgcaagcagccacacttgatgtgcctttaatcgtagaa
gccgatgaaggtgaaaactgggaacaagctcactaa
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