Pseudoalteromonas carrageenovora: PC2016_0480
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Entry
PC2016_0480 CDS
T06565
Name
(GenBank) 16S rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcar03009
]
PC2016_0480
Enzymes [BR:
pcar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PC2016_0480
Ribosome biogenesis [BR:
pcar03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PC2016_0480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Band_7_1
Motif
Other DBs
NCBI-ProteinID:
QBJ70725
LinkDB
All DBs
Position
I:complement(551808..552506)
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AA seq
232 aa
AA seq
DB search
MKFPCRLDKFVSHLAELPRSKARAAIKRQAATVNGEVVTAFDFQVKQQDEIMFEGEQLVF
LGKRYYMLNKPVGYVCANSDELHRTVFDLLDEPNMADFHVAGRLDIDTTGLVIITNDGDW
SHKITSPKNNKFKTYLVETQEPITDESLEQLRVGVQLHNEKDLTRPAKAERLANFGLRLS
ICEGKYHQVKRMLAAVDNKVVELHREQIAGIKLDENLASGEYRQLTVEEVKL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcccttgccgcttagataaatttgttagccatttagcagaacttcctcgctca
aaagcacgcgctgcaattaagcgccaggctgcaactgtaaatggcgaagtagttactgca
ttcgactttcaagtaaagcaacaagacgaaataatgtttgaaggtgaacaactcgtattt
ttaggtaaacgttactacatgctaaataagcccgtgggttacgtatgcgcaaatagtgat
gaattacacagaacggtttttgacttacttgatgagcctaatatggccgactttcatgtg
gcaggccgacttgatatagacaccacaggtttagttattattaccaacgatggtgattgg
tctcataaaatcacttcaccaaaaaataataaatttaaaacctacctagtagaaacccaa
gaaccgattaccgacgagtcgcttgagcaattgcgagtaggcgttcaactgcataacgaa
aaagacttaacacgcccagcaaaagcagagaggctcgctaactttgggctacgtttatct
atttgtgaaggtaagtaccatcaagttaaacgcatgttagccgctgtagacaacaaagta
gtagagctacaccgtgagcaaattgccggtattaaactagatgaaaacctagccagtggt
gagtatcgccagttaactgtcgaagaagttaaactttaa
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