Pseudoalteromonas carrageenovora: PC2016_0509
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Entry
PC2016_0509 CDS
T06565
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PC2016_0509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcar03019
]
PC2016_0509
03009 Ribosome biogenesis [BR:
pcar03009
]
PC2016_0509
Messenger RNA biogenesis [BR:
pcar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PC2016_0509
Ribosome biogenesis [BR:
pcar03009
]
Eukaryotic type
Pre-60S particles
RNases
PC2016_0509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBJ70753
LinkDB
All DBs
Position
I:580359..580904
Genome browser
AA seq
181 aa
AA seq
DB search
MTINKSNLIWLDLEMTGLEPANDKILEIATVVTDADLNILAEGPTIAIHQSDELLNGMDE
WCTTQHGKSGLTARCKASTFDEAYAVEQTLDFLKQWVPAGASPMCGNSIGQDRRFMNKYM
RELEDFFHYRNLDVSTIKELARRWKPEVLAQVNKKGSHLALDDIKDSIMELKVYREKFFN
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgactattaataaatcaaatttaatttggctcgatctggaaatgaccggacttgaacct
gcgaacgacaaaatacttgaaattgcgactgttgtcactgacgccgacttgaatatatta
gccgaagggccaactattgcaattcatcaaagcgatgaattacttaatggtatggatgag
tggtgtactacacaacatggtaaatcaggattaacagcgcgctgtaaagcgagtactttt
gatgaagcgtacgctgtagagcaaacactagactttttaaagcagtgggtgccagcgggg
gcatcgccaatgtgcggtaactcgataggccaagacagacgctttatgaataagtacatg
cgtgagcttgaggacttttttcattaccgtaacttagatgtaagtactattaaagaatta
gcccgtcgttggaagcctgaagttttagctcaggtgaataaaaaagggtcacaccttgca
cttgatgacattaaagattctattatggaattaaaggtctatagagaaaaattctttaat
ttgtaa
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