Pseudoalteromonas carrageenovora: PC2016_0780
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Entry
PC2016_0780 CDS
T06565
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_0780
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PC2016_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
AAA_22
Lon_C
SLFN-g3_helicase
AAA
nSTAND3
AAA_16
ABC_tran
AAA_14
AAA_18
NPHP3_N
cobW
Rad51
AAA_30
AAA_19
ATPase_2
AAA_11
AAA_24
NACHT
TsaE
Thymidylate_kin
CobU
NTPase_1
VapE-like_dom
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QBJ71019
LinkDB
All DBs
Position
I:872473..873858
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AA seq
461 aa
AA seq
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MVKAAKVEFVCTECGMNYQRWQGQCRCGAWNTLAEFKPSAGQSKKAAVRATVGGYAGGVG
GGSKKINDIATAEAEKQLTEIGELDRVLSGGVTTGSVNIISGDPGAGKTTLLSDLVARMS
QRMPSLYCTAEESLSQFKNRVNRLKLNYNADELYLLSETSVETIIEELDKNKIKFAVIDS
IQAVVTDTANGSPGSPSQVKSAAQALTQYCKQNDVTMFIIAHVNKNNEIAGPQTLVHIVD
ALLHIDTNDGQVRTLRANKNRFGDIDTVGIFKMCERGMLSVDNPSEIFLSGSSTESPGST
ITCIRKGNRNLLLEIQCLTTETEAEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTFF
NIVGGLRIDETETCIDLALVTALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKE
AAQHGFTEIFIPFRNYHKSMEGLGAKITPVKTVHELLSLIN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagcggcaaaagtagaatttgtttgtaccgaatgtggcatgaactatcaacgt
tggcagggtcaatgtcgctgcggcgcatggaacacactagcagagtttaaaccctcagca
gggcaaagcaaaaaagcagcagtaagagcgactgttggaggctatgccggtggtgttggc
ggtggttctaaaaaaataaatgatattgccacagcagaagccgaaaaacagttaactgaa
attggcgagttagaccgagtattaagcggcggcgttactaccggctcagttaatattatt
tcgggtgaccctggagcgggtaaaacaacgcttttatctgacttagttgccagaatgtct
cagcgtatgccatcgctttactgtacggcagaggagtcgttgtcacagtttaaaaaccgt
gtaaacaggttaaagcttaattacaacgctgatgaactttacttactctcagaaactagc
gtagaaaccattattgaagagcttgataaaaataaaattaagtttgcagtaattgactct
attcaagcggtcgttaccgatactgcaaatggcagcccaggttcgccttcgcaagtaaaa
agtgctgcgcaagcgcttacacaatactgtaagcaaaacgatgtcaccatgtttattatt
gcccatgttaataaaaataatgaaatagcagggccgcaaacattagtacatatagttgat
gcgcttttgcatatagatactaacgatgggcaggtacgtactcttagggcaaataaaaac
cgctttggcgacattgataccgtaggtatatttaaaatgtgtgagcggggtatgcttagc
gttgataacccaagcgagatttttttatcgggttcaagtacggaatcgccaggctctacc
attacctgtattcgtaaaggtaaccgtaacttattgctcgaaatacaatgtttaactacc
gaaaccgaagctgagttcccgcagcgtgtatgtgtaggtttaaacatgaaccgtataaaa
atgcttactggtattttacgtaaacacaccaaaactaaaatattccacgatacgtttttt
aatattgtgggcggtttacgaatcgatgaaaccgaaacctgtattgatttagcgttagtg
actgcgcttttaagtagcttaaacgaatttgtagtaccgcgtacaacctgcattatgggt
gagcttagcttaaacggcgacgtacgcccaatcgacagtggtgtgccgcgagttaaagag
gctgcgcagcatggttttaccgaaatatttattccatttcgtaattaccataaatctatg
gaaggcttaggtgctaaaattacaccagtaaaaacagtgcatgagctgcttagtttgatt
aattaa
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