Pseudoalteromonas carrageenovora: PC2016_0801
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Entry
PC2016_0801 CDS
T06565
Name
(GenBank) tRNA pseudouridine13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcar03016
]
PC2016_0801
Enzymes [BR:
pcar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PC2016_0801
Transfer RNA biogenesis [BR:
pcar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PC2016_0801
Prokaryotic type
PC2016_0801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QBJ71040
LinkDB
All DBs
Position
I:890428..891477
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AA seq
349 aa
AA seq
DB search
MSDLNYLYGAPLSKADFKTTAEDFMVDEDLGIEFTGSGEHVCLQVVKKGENTQYVAKIIA
QKAGVSPRDVSYAGMKDRHGVCSQWFSVKVPIKKHIDFSELNSESIFIVSQQRHERKLRT
GCHKGNKFTITLRNVTQPLDILCRINAVRSGVPNYFGEQRFGHGGHNLVMAEKMFAGERI
RDKKLRGIIISAARSHVFNQIVSLRVNEHGLAKTMHREVFMLSGSNAFFEDAISDENIAR
LASGDIMMSAPMVGKSEKGLTDQEKTWLKPYQAWCDGLGELGLKNERRMLRLIPQDLSVE
TLDGTTLKLSFGLPKGCFATALLRELVDYTDASPRERKEKDSNNEDTSK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttaaattatttatacggtgcaccactctctaaagcggactttaaaaccacg
gctgaagattttatggtggatgaagatttaggtattgagtttactggcagcggtgagcat
gtttgcttacaagtggttaaaaaaggcgaaaacacacaatatgttgctaaaattatcgct
caaaaagcaggtgtatctccacgtgatgtaagttacgcgggcatgaaagatcgccacggt
gtatgtagccaatggtttagcgtaaaagtgcctattaaaaagcatattgattttagtgag
cttaacagcgagagcatttttatagtttcgcagcagcgccatgagcgaaaactacgaacg
ggttgtcataagggcaataaatttactattacgcttcgtaatgttacacagccgcttgat
atattgtgccgtataaatgcggtgcgttcaggtgtgccaaactactttggtgagcagcgc
tttgggcacggcggccataacttagtaatggccgaaaaaatgtttgctggggagcgtatt
cgcgataaaaagctacgcggtattatcatttctgcagcgcgctcgcacgtatttaaccaa
atagtaagcttgcgtgtaaacgaacatggcttagccaaaaccatgcaccgcgaagtattt
atgctaagcggcagtaatgcgttttttgaagatgcaataagtgatgagaacatagctcgc
ttagcttctggcgatattatgatgtcggcacctatggtaggtaaaagcgaaaaaggctta
accgatcaagaaaaaacatggctcaaaccataccaagcatggtgcgatggcttaggtgag
cttggtcttaaaaatgaacgcagaatgctaaggcttataccacaagacttatctgttgaa
acacttgatggaactacgttaaaactaagttttggtttacctaaagggtgttttgcaacc
gcattattacgtgagctggtggattataccgatgctagccctcgcgagcgaaaagaaaag
gacagcaataatgaagatacttctaagtaa
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