Pseudoalteromonas carrageenovora: PC2016_1012
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Entry
PC2016_1012 CDS
T06565
Name
(GenBank) N utilization substance protein A
KO
K02600
transcription termination/antitermination protein NusA
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcar03021
]
PC2016_1012
03009 Ribosome biogenesis [BR:
pcar03009
]
PC2016_1012
Transcription machinery [BR:
pcar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PC2016_1012
Ribosome biogenesis [BR:
pcar03009
]
Prokaryotic type
rRNA transcription factors
PC2016_1012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
Glyoxalase_4
Motif
Other DBs
NCBI-ProteinID:
QBJ71246
LinkDB
All DBs
Position
I:1134794..1136293
Genome browser
AA seq
499 aa
AA seq
DB search
MAKEILLVAEAVSNEKAVPKEKIFEALEFALATATKKKHDGEIEVRVAIDRKTGDYDTFR
RWQIAAVQEDGSLENPYSEITLEAAQVEEPDLQMGDYVEEQIESIKFDRITTQMAKQVIV
QKVREAERALVVEAYKDQEGELVTGVVKKATRDAIVLDLGNNAEAVIYRDDMLPRENFRP
GDRIRGLLYEVKPEARGAQLFVTRSKPEMLMELFRIEVPEIGEEMIELRAAARDPGSRAK
IAVKSNDKRIDPVGACVGMRGARVQAVSSELGGERVDIVLYDDNPAQFVINAMAPAEVAS
IVMDEDTHSMDIAVEADNLAQAIGRNGQNVRLASQLTGWELNVMTVEDMRTKNEAESDKL
INLFTENLDIDDEFASLLINEGFSTLEEVAYVPASEFLEIDGLDEETVDVLRSRAKDALT
TKALKTEESLDGVEPAEDLLALEGLERHLAFVMASKGVVTLEDLAEQGIDELVDITELSP
EKAGELIMAARNICWFADE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagatattattggttgctgaagccgtttccaatgagaaagcggttccaaaa
gaaaagatttttgaagctttagagttcgctctagcaacagcaacaaagaaaaaacacgat
ggcgaaattgaagtgcgtgtagcaattgaccgtaaaacgggcgattacgatacgttccgt
cgttggcaaattgcagcagtacaagaagatggttcattagaaaacccttacagcgaaatc
acactagaagcagctcaagttgaagaacctgatttgcaaatgggcgattacgttgaagaa
cagattgaatctatcaaatttgaccgcataactacacagatggcaaaacaagttatcgta
caaaaagtacgagaagctgaacgtgctctagttgtagaagcttataaagatcaagaaggc
gagcttgttacaggtgtagttaaaaaagcgacccgtgatgcaattgtacttgatttaggt
aataacgcagaagctgttatttaccgtgacgatatgcttccacgtgaaaacttccgtcca
ggggatcgtattcgtggtcttctttacgaagttaaaccagaagcacgtggcgcacaatta
tttgttacgcgttcaaaaccagaaatgctgatggaattattccgcattgaggtgccagaa
attggcgaagaaatgattgaattacgtgccgcagcacgtgatccaggttctcgtgctaaa
atcgctgttaaatctaacgacaaacgtattgacccagtgggtgcgtgtgttggtatgcgt
ggcgcacgtgttcaagctgtatcgtcagaacttggcggtgagcgtgttgatatcgttctt
tacgatgacaacccggcgcagtttgttattaacgcaatggcacctgcagaagtagcttca
atcgtaatggatgaagacactcactcaatggatatcgctgttgaagcagataacctagca
caagcaattggtcgtaatggtcaaaacgttcgtttagcaagccaattaactggctgggaa
ctaaacgtaatgactgttgaagacatgcgtactaaaaatgaagctgagtcagataagtta
attaacttatttactgaaaacttagatatcgatgatgagtttgcatcattacttatcaac
gaaggtttctcgacacttgaagaagtggcgtatgtacctgcatcagagtttttagaaatt
gatggcttagatgaagaaacagtagacgttttacgttcacgtgcaaaagacgcgttaacg
actaaagcgcttaaaacggaagaaagcttagatggtgtagagccagctgaagacttactt
gcgcttgaaggcttagaacgtcatttggcatttgttatggcaagtaaaggtgtagttaca
cttgaagacttagctgagcaaggcatcgacgaactagttgatattacagagctatcacct
gaaaaagcaggtgaattaattatggctgcacgtaatatttgttggtttgcagacgagtaa
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