Pseudoalteromonas carrageenovora: PC2016_1218
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Entry
PC2016_1218 CDS
T06565
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar03030
DNA replication
pcar03430
Mismatch repair
pcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC2016_1218
03430 Mismatch repair
PC2016_1218
03440 Homologous recombination
PC2016_1218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcar03032
]
PC2016_1218
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_1218
Enzymes [BR:
pcar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC2016_1218
DNA replication proteins [BR:
pcar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PC2016_1218
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PC2016_1218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
AAA_18
AAA_7
AAA_30
AAA_assoc_2
AAA_16
AAA_19
PIF1
AAA_2
RCF1-5-like_lid
nSTAND3
TsaE
Rad17
Mg_chelatase
ABC_tran
Herpes_V23
Motif
Other DBs
NCBI-ProteinID:
QBJ71443
LinkDB
All DBs
Position
I:1371406..1373925
Genome browser
AA seq
839 aa
AA seq
DB search
MSYQVLARKWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAK
SLNCDEGISASPCGKCSSCTDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRH
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQ
SEIKTQLEHVLTHEQLSFDNDALSIIAKAADGSMRDALSLTDQAIAQTNGDINNQAVQTM
LGLMDTHYSQSLLAALLAQDGPALMNEIAQVASRNPNYVALLDDLIALTHLVQLSQLIPE
AAALDEKNVDYIAHVAEHTSAQQIQVYYQLLLNGKKDLQWAPEPRLGFEMIMLRLLAFEP
TQTEHKQAVPLAAQEPVENKPVRASALRDILNKNKTSQKTTGNQSSPSTNSTQALDNTSQ
LNTQKQESMVQVPPVQEPSVANEVSNTQPATIEAKPPVQQPEQVNEQPKSTVISDAQAQH
QSEDEAYMQHSDAEQTLASQFDDIMNSAVEQGFNPAQSTNSESPSEPASSESAVSQNTST
PIAEQDAQAQSAIARILRDRNISGAGRLSGANTRTAENNASEPLTKPSAKEPSQHPRMPK
VATSQNAQPASNESAPNLDAIDDAPPWATNSAGESEKKHELPVTGGQTESLNQANTKPAR
KIDFKEKHQTITENLAPELLEQINPQKVVEAAPEEPSIPVPDDFQSPISEIRFAHQQDEW
AYLIKRMGLGGRMRQFALHSIFTKQGNNLHIDVDESQKHLDTPVLRQKLDAALSSIYEHN
VSLSINFAKGVIDSPYLIQQKIDVGRHQQAIDVITTDDNIVQFQQVFSAEIDENSIQAL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctagcgagaaaatggcgtccacaaacctttcatgaattggttggg
cagtctcatgttaaacaagcgctggttaatgcgcttacacaaaatagactgcatcacgcg
tatttattcactggaacccgaggtgtgggtaaaaccaccattgcgcgtatctttgctaaa
agcttaaattgtgatgaaggcatttctgcatctccttgtggaaagtgtagtagctgtaca
gatatagaagcaggtcgttatatagacttacttgaaatagatgcagcctctcgtactaaa
gtagaagatacccgcgaaatacttgataacgtgcaatatgcgccaacgcgcgggcgtcat
aaagtatacctaatagatgaagttcacatgctctcaaagcatagctttaatgccctttta
aaaacgttagaagagccaccagagcatgtgaaatttttattagcgacaaccgatccacaa
aaattacctgtcactattttatctcgttgcttacaatttaacttaaatgcattatcgcaa
agtgaaattaaaactcagttagagcatgtattaactcatgagcaactaagttttgacaat
gatgcgcttagcattattgcaaaagcggctgatggcagtatgcgcgatgcgcttagttta
actgaccaagcgatagcgcaaacaaatggtgatataaataatcaagcagtacaaactatg
cttggtttaatggatacgcattatagccaaagtttacttgccgcattattagcgcaagat
ggcccagcgcttatgaatgaaatagcgcaagttgctagtcgtaacccaaattatgtagca
ttacttgatgatttaattgcacttacgcatttagttcaattaagtcagcttattcctgaa
gctgcagcacttgatgaaaagaacgttgattatattgcacatgttgctgagcatacgagt
gcacaacagattcaagtgtattatcaactcctgttaaatggtaaaaaagatttacagtgg
gcaccagagcctcgcctaggctttgaaatgataatgctaaggctattagcatttgagcca
acgcaaaccgagcataaacaggctgtgcctttagcagctcaagagcctgttgaaaataaa
ccagttagagcgagtgcactgcgagatatattaaataaaaataaaacatcgcaaaaaaca
acaggtaaccaaagtagtccttcaactaacagcacacaagctttagataatacttcacag
ctaaacactcaaaaacaagagtcaatggttcaagtaccacctgtacaagagccgtcagtt
gccaatgaagtttcgaatacgcagcccgctacaattgaggccaagccgccagttcaacaa
cctgaacaggttaatgagcagccaaaaagtactgtaatttcagatgcacaagctcagcat
caaagtgaagatgaagcttatatgcaacatagcgatgctgagcaaacactcgcttcgcaa
tttgacgatataatgaacagtgccgtagagcagggatttaaccctgcgcaaagcactaat
tcagagtcaccctctgagccggcatcaagtgaaagtgcggttagccaaaatacgagtaca
ccaattgcagagcaagacgctcaggcgcaatcggctattgcccgtattttacgtgacaga
aatatatcgggcgcaggtagactttcaggtgcaaatactcgcactgctgaaaataacgca
tcagagccgttaaccaagccaagtgcaaaagaacctagccagcatcctagaatgccaaaa
gtagcaacgagtcaaaatgcacagccagcgagtaatgaaagcgcaccaaaccttgatgca
attgacgatgcaccaccatgggcaaccaatagtgcaggtgagagtgaaaaaaagcatgag
ctcccagtaacagggggccaaacagagtcacttaatcaagcaaatacaaaaccagcacgt
aagattgactttaaagaaaaacatcaaacaattactgaaaacttagcgccagagttactt
gaacaaattaatcctcaaaaggtggtagaagccgcccctgaagagccaagtattccggtg
cccgatgattttcaaagcccgatcagcgaaattaggtttgcacatcagcaagatgaatgg
gcttatttaattaagcgtatgggcttaggggggcgtatgcgccagtttgcgttgcactcc
atttttactaagcaaggtaacaatttgcatattgatgttgatgaatcacaaaaacattta
gatacacctgtgcttcgccaaaaattagatgcagcactatcaagcatttatgagcataat
gtatcgcttagcattaattttgcaaaaggggtgatagattcaccttacttaattcaacaa
aaaatagatgtaggtcgtcatcaacaagcaatcgatgtgatcacaacggatgacaatata
gtgcagtttcagcaggtatttagcgcggaaattgacgaaaatagcattcaggcattgtaa
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